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Schema
Citing CMDGA
Clear Filters
Annotation type
8
candidate regulatory elements
7
target gene predictions
4
chromatin state
1
accessible chromatin
1
eQTL
1
gene expression
Annotation Category
7
Target gene links
1
cis-regulatory elements
Annotation type Category
6
DNase-seq
4
ChIP-seq
2
pCHi-C
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
8
bed bed3+
File set status
8
released
Genome assembly (visualization)
8
hg19
Organism
8
Homo sapiens
Biosample type
7
tissue
in vitro differentiated cells
1
stem cell
Biosample term
55
HeLa-S3
40
H1-hESC
26
retina
25
heart
24
K562
24
kidney
24
stomach
23
endothelial cell
21
monocyte
20
A549
20
fibroblast
20
pericyte cell
20
pigmented layer of retina
19
CD14-positive monocyte
19
HFFc6
18
adrenal gland
18
brain
18
small intestine
17
lung
17
macrophage
17
muscle of arm
16
B cell
16
muscle of leg
16
placenta
15
large intestine
15
smooth muscle cell
15
thymus
14
common myeloid progenitor, CD34-positive
14
liver
13
left lung
13
muscle of back
12
astrocyte
12
excitatory neuron
12
right lung
11
hepatocyte
11
pancreatic beta cell
11
pancreatic ductal cell
11
renal pelvis
11
right kidney
10
T cell
10
adipose tissue
10
heart left ventricle
10
pancreas
10
pancreatic acinar cell
10
pancreatic alpha cell
10
pituitary stalk
10
renal cortex interstitium
10
spinal cord
10
spleen
9
CD4-positive, alpha-beta memory T cell
9
CD8-positive, alpha-beta T cell
9
EndoC_BH1
9
GM12878
9
left kidney
9
pancreatic delta cell
9
psoas muscle
9
regulatory T cell
8
H9
8
fibroblast of cardiac tissue
8
glutamatergic neuron
8
islet of Langerhans
8
natural killer cell
8
sigmoid colon
7
CD8-positive, alpha-beta memory T cell
7
MCF-7
7
colon epithelial cell
7
erythroblast
7
keratinocyte
7
lymphocyte
7
osteoblast
7
ovary
7
skeletal muscle satellite cell
6
T-helper 1 cell
6
coronary artery
6
endothelial cell of hepatic sinusoid
6
endothelial cell of umbilical vein
6
gastrocnemius medialis
6
heart right ventricle
6
memory B cell
6
mononuclear cell
6
olfactory receptor cell
6
thyroid gland
6
tibial nerve
6
transverse colon
6
trophoblast cell
6
type II pneumocyte
5
HUES8
5
HepG2
5
T-helper 17 cell
5
T-helper 2 cell
5
body of pancreas
5
caudate nucleus
5
cortical cell of adrenal gland
5
gabaergic neuron
5
inhibitory neuron
5
luminal epithelial cell of mammary gland
5
mammary gland epithelial cell
5
muscle of trunk
5
naive B cell
5
naive thymus-derived CD8-positive, alpha-beta T cell
5
pancreatic stellate cell
5
right atrium auricular region
5
skeletal muscle fiber
5
skin fibroblast
5
tibial artery
4
Ammon's horn
4
CD4-positive, alpha-beta T cell
4
CyT49
4
Peyer's patch
4
aorta
4
blood vessel smooth muscle cell
4
breast epithelium
4
chorion membrane
4
chorionic villus
4
endocrine pancreas
4
endothelial cell of lymphatic vessel
4
enteric smooth muscle cell
4
epithelial cell of prostate
4
fibroblast of dermis
4
fibroblast of lung
4
frontal cortex
4
glomerular visceral epithelial cell
4
hepatic stellate cell
4
iPSC derived cell line
4
kidney tubule cell
4
megakaryocyte
4
omental fat pad
4
pancreatic A cell
4
retinal pigment epithelial cell
4
skeletal muscle myoblast
4
smooth muscle cell of the esophagus
4
testis
4
trophoblast
4
type B pancreatic cell
4
type I muscle cell
4
type I pneumocyte
4
type II muscle cell
4
upper lobe of left lung
3
cardiac fibroblast
3
CD4-positive helper T cell
3
GM18507
3
GM19240
3
H7-hESC
3
HAP-1
3
HCT116
3
HT-29
3
IMR-90
3
Jurkat
3
KARPAS-422 cell
3
LoVo cell
3
MM.1S
3
NAMALWA cell
3
OCI-LY7
3
PC-9
3
SK-N-DZ
3
SK-N-SH
3
U937
3
activated CD4-positive, alpha-beta T cell
3
ascending aorta
3
basal cell
3
bronchial epithelial cell
3
cerebellum
3
choroid plexus epithelial cell
3
ciliated cell
3
club cell
3
endocardial cell
3
endometrium adenocarcinoma
3
enteric neuron
3
enterocyte
3
esophagus
3
esophagus muscularis mucosa
3
esophagus squamous epithelium
3
eye
3
globus pallidus
3
glomerular endothelial cell
3
immortal human breast epithelial cell line cell
3
kidney glomerular epithelial cell
3
layer of hippocampus
3
left renal cortex interstitium
3
left renal pelvis
3
limb
3
medulla oblongata
3
mesenchymal stem cell
3
mesothelial cell
3
midbrain
3
naive T cell
3
naive thymus-derived CD4-positive, alpha-beta T cell
3
neurosphere
3
neutrophil
3
occipital lobe
3
oligodendrocyte
3
oligodendrocyte precursor cell
3
pancreatic polypeptide-secreting cell
3
plasma cell
3
plasmacytoid dendritic cell
3
pons
3
prostate gland
3
putamen
3
renal cortical epithelial cell
3
right renal cortex interstitium
Organ
7
gonad
7
ovary
Life stage
3
adult
1
embryonic
Date released
4
September, 2022
2
March, 2020
1
June, 2020
1
May, 2021
Software used
4
r
2
nospecificsoft_customcode
1
abc
1
macs
Lab
7
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
8
AMP
RFA
8
AMP
biosample_type!
in vitro differentiated cells
organ_slims!
penis
Showing 8 of 8 results
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Download
FileSet
DSR249ZSK
released
Annotation file set
: Target gene predictions for BSS01403 ovary from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR789MNT
released
Annotation file set
: Target gene predictions for BSS01402 ovary from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR594TVG
released
Annotation file set
: Target gene predictions for BSS01401 ovary from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR097PMM
released
Annotation file set
: Target gene predictions for BSS01399 ovary from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR547QBE
released
Annotation file set
: enhancer-gene predicton of ovary-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR007KDG
released
Annotation file set
: Accessible chromatin annotation for Gonad Ovary from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR751JBO
released
Annotation file set
: A target gene prediction annotation in Human Ovary of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR579JEW
released
Annotation file set
: A target gene prediction annotation in Human Mesendoderm of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP