Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
3
accessible chromatin
2
target gene predictions
1
variant allelic effects
Annotation Category
3
cis-regulatory elements
2
Target gene links
Annotation type Category
2
ATAC-seq
2
pCHi-C
1
DNase-seq
Available data
5
bed bed3+
3
bigWig
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
3
Homo sapiens
Biosample type
5
primary cell
Biosample term
3
B cell
3
CD8-positive, alpha-beta T cell
3
monocyte
3
naive B cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
2
CD4-positive, alpha-beta T cell
2
T follicular helper cell
2
T-helper 1 cell
2
T-helper 17 cell
2
T-helper 2 cell
2
central memory CD8-positive, alpha-beta T cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
gamma-delta T cell
2
islet of Langerhans
2
mature natural killer cell
2
memory B cell
2
memory T cell
2
memory regulatory T cell
2
naive regulatory T cell
2
regulatory T cell
1
activated CD4-positive, alpha-beta T cell
1
adult endothelial progenitor cell
1
alternatively activated macrophage
1
endothelial cell of umbilical vein
1
erythroblast
1
immature natural killer cell
1
inflammatory macrophage
1
left renal cortex interstitium
1
lymphocyte of B lineage (iPSC)
1
macrophage
1
medulla oblongata
1
megakaryocyte
1
midbrain
1
myeloid dendritic cell
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
natural killer cell
1
neutrophil
1
plasma cell
1
plasmacytoid dendritic cell
1
right kidney
1
right renal cortex interstitium
1
skeletal muscle myoblast
1
thymus
Date released
15
May, 2021
5
May, 2020
4
January, 2021
3
June, 2020
2
September, 2022
Software used
2
chicago
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
Showing 5 of 5 results
table-tab-icon
matrix-icon
Download
FileSet
DSR326PAN
released
Annotation file set
: Accessible chromatin of skeletal muscle myoblast ENCODE DHSseq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR532XSI
released
Annotation file set
: Target gene predictions annotation of EGAS00001001911 promoter capture Hi-C of naive thymus-derived CD4-positive, alpha-beta T cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR499JJX
released
Annotation file set
: Target gene predictions annotation of EGAS00001001911 promoter capture Hi-C of monocyte
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR157QFX
released
Annotation file set
: GSE118189 ATACseq accessible chromatin of normal monocyte
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR125CHQ
released
Annotation file set
: GSE118189 ATACseq accessible chromatin of LPS-stimulated monocyte
Lab:
AMP-T2D consortium
Project:
AMP