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Schema
Citing CMDGA
Clear Filters
Annotation type
8
candidate regulatory elements
6
target gene predictions
4
chromatin state
1
accessible chromatin
1
eQTL
1
gene expression
1
variant allelic effects
Annotation Category
6
Target gene links
1
cis-regulatory elements
Annotation type Category
6
DNase-seq
4
ChIP-seq
2
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
8
bed bed3+
bigWig
File set status
7
released
Genome assembly (visualization)
7
hg19
1
GRCh38
Organism
7
Homo sapiens
Biosample type
6
tissue
1
primary cell
Biosample term
6
thyroid gland
1
thyroid follicular cell
Organ
171
epithelium
111
connective tissue
97
brain
94
embryo
91
musculature of body
90
kidney
84
lung
83
intestine
69
bodily fluid
67
blood
60
uterus
56
pancreas
55
limb
54
heart
52
skin of body
51
large intestine
42
extraembryonic component
41
vasculature
33
blood vessel
33
stomach
32
eye
31
liver
24
small intestine
23
mammary gland
22
adrenal gland
21
bone element
20
prostate gland
19
placenta
17
lymph node
15
adipose tissue
15
gonad
15
thymus
14
penis
14
ureter
12
esophagus
11
artery
11
spinal cord
10
pituitary gland
9
spleen
8
lymphoid tissue
8
ovary
7
thyroid gland
6
testis
5
mouth
5
vein
4
breast
4
bronchus
4
lymphatic vessel
4
nerve
4
urinary bladder
3
bone marrow
3
skeleton
3
tongue
2
nose
2
vagina
1
trachea
Life stage
4
adult
Date released
4
September, 2022
1
June, 2020
1
May, 2021
1
November, 2021
Software used
4
r
2
abc
1
macs
Lab
5
AMP-T2D consortium
1
Bing Ren, UCSD
1
Jesse Engreitz, Stanford University
Project
6
AMP
1
ENCODE
RFA
6
AMP
1
ENCODE3
files.file_type!
bigWig
Showing 7 of 7 results
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Download
FileSet
DSR803IKN
released
Annotation file set
: Target gene predictions for BSS01835 thyroid gland from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR568XLZ
released
Annotation file set
: Target gene predictions for BSS01834 thyroid gland from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR720XOL
released
Annotation file set
: Target gene predictions for BSS01832 thyroid gland from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR854RXL
released
Annotation file set
: Target gene predictions for BSS01831 thyroid gland from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR121IWB
released
Annotation file set
: Target gene predictions of Thyroid Follicular Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR632XJX
released
Annotation file set
: enhancer-gene predicton of thyroid_gland-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR292QNC
released
Annotation file set
: Accessible chromatin annotation for Others Thyroid Gland from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP