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Schema
Citing CMDGA
Clear Filters
Annotation type
6
candidate regulatory elements
5
chromatin state
4
target gene predictions
3
accessible chromatin
2
binding sites
1
gene expression
1
variant allelic effects
Annotation Category
3
cis-regulatory elements
1
Genetic variant effects
Annotation type Category
3
DNase-seq
1
snATAC-seq
Available data
3
bed bed3+
1
bigWig
File set status
4
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
17
monocyte
9
hepatocyte
8
fibroblast
6
endothelial cell
5
cardiac fibroblast
5
osteoblast
5
pancreatic beta cell
5
smooth muscle cell
4
endothelial cell of hepatic sinusoid
4
glutamatergic neuron
4
macrophage
4
pancreatic alpha cell
4
pancreatic ductal cell
4
regulatory T cell
4
skeletal muscle fiber
3
T cell
3
T-helper 1 cell
3
cardiac muscle cell
3
endothelial cell of umbilical vein
3
enterocyte
3
glomerular endothelial cell
3
hepatic stellate cell
3
kidney glomerular epithelial cell
3
myofibroblast cell
3
pancreatic acinar cell
3
pancreatic delta cell
3
renal cortical epithelial cell
3
skeletal muscle myoblast
2
B cell
2
CD8-positive, alpha-beta T cell
2
Schwann cell
2
T follicular helper cell
2
T-helper 17 cell
2
T-helper 2 cell
2
acute myeloid leukemia cell
2
adipocyte
2
aortic endothelial cell
2
astrocyte of the cerebellum
2
astrocyte of the hippocampus
2
basal cell
2
bone marrow cell
2
brain pericyte
2
central memory CD8-positive, alpha-beta T cell
2
choroid plexus epithelial cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
epithelial cell of esophagus
2
epithelial cell of proximal tubule
2
gamma-delta T cell
2
glomerular visceral epithelial cell
2
goblet cell
2
kidney capillary endothelial cell
2
kidney epithelial cell
2
kidney tubule cell
2
leukocyte
2
mature natural killer cell
2
memory B cell
2
memory T cell
2
memory regulatory T cell
2
mesenchymal stem cell
2
naive B cell
2
naive regulatory T cell
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
pancreatic polypeptide-secreting cell
2
retinal pigment epithelial cell
2
skeletal muscle cell
2
skeletal muscle satellite cell
2
smooth muscle cell of the brain vasculature
2
type I muscle cell
2
type II muscle cell
2
vascular associated smooth muscle cell
1
brain microvascular endothelial cell
1
retinal pigment epithelial cell
1
B-Lymphocytes
1
B-lymphocyte
1
CD1c-positive myeloid dendritic cell
1
CD4-Positive T-Lymphocytes
1
Glioblastoma
1
Heart fetal (cardiac muscle cell)
1
Ishikawa
1
Liver fetal (hepatocyte)
1
Satellite Cells, Skeletal Muscle
1
Th1 cell
1
Th17 cell
1
Th2 cell
1
aortic adventitial fibroblast
1
astrocyte
1
brain microvascular endothelial cell
1
bronchial epithelial cell
1
bronchial goblet cell
1
cortical cell of adrenal gland
1
dedifferentiated amniotic fluid mesenchymal stem cell
1
erythroid cell
1
fibroblast of mammary gland
1
fibroblast of peridontal ligament
1
fibroblast of pulmonary artery
1
fibroblast of villous mesenchyme
1
foreskin fibroblast
1
gabaergic neuron
1
glial cell
1
granulosa cell
1
immature natural killer cell
1
iris pigment epithelial cell
1
keratinocyte
1
kidney distal convoluted tubule epithelial cell
1
kidney interstitial cell
1
kidney loop of Henle epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal convoluted tubule epithelial cell & kidney proximal straight tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
luminal epithelial cell of prostatic duct
1
lymphocyte of B lineage
1
lymphocyte(CL:0000542) and natural killer cell(CL:0000623)
1
macrophage(CL:0000235) and neutrophil(CL:0000775)
1
mammary epithelial cell
1
mammary gland epithelial cell
1
mast cell
1
mesothelial cell
1
microglial cell/astrocyte
1
myeloid dendritic cell
1
naive t cell
1
natural killer cell
1
neoplastic cell
1
neural cell
1
neuron
1
non-neuronal cell
1
non-pigmented ciliary epithelial cell
1
oligodendrocyte
1
pancreatic endocrine cell
1
pancreatic endothelial cell
1
pancreatic immune cell
1
pancreatic stellate cell
1
parietal cell
1
peptic cell
1
peripheral blood stem cell
1
plasma cell
1
plasmacytoid dendritic cell
1
preadipocyte
1
primordial germ cell
1
proximal tubule cells with injury markers
1
pulmonary artery endothelial cell
1
pulmonary interstitial fibroblast
1
renal epithelial cell
1
renal intercalated cell
1
renal principal cell
1
skin fibroblast
1
somatic gonadal cell
1
thyroid follicular cell
1
tracheal epithelial cell
1
trophoblast cell
1
type II pneumocyte
Organ
3
blood vessel
3
epithelium
3
vasculature
3
vein
Life stage
2
newborn
Date released
2
May, 2020
1
February, 2024
1
June, 2020
Software used
2
macs
1
deltasvm
Lab
3
AMP-T2D consortium
1
Stephen Parker, UMich
Project
4
AMP
1
ENCODE
RFA
3
AMP
1
AMP2
Showing 4 of 4 results
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Download
FileSet
DSR154JTR
released
Annotation file set
: Cell type chromatin broad peaks and bw of glial Schwann from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR690SAR
released
Annotation file set
: Accessible chromatin annotation for Cardiovascular HUVEC from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR088CRI
released
Annotation file set
: Variant allelic effects of endothelial cell of umbilical vein ENCODE DHSseq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR603NLX
released
Annotation file set
: Accessible chromatin of endothelial cell of umbilical vein ENCODE DHSseq
Lab:
AMP-T2D consortium
Project:
AMP