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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
44
candidate regulatory elements
24
chromatin state
24
target gene predictions
4
accessible chromatin
3
eQTL
3
histone modifications
2
binding sites
2
gene expression
1
variant allelic effects
Annotation Category
4
cis-regulatory elements
1
Genetic variant effects
Annotation type Category
4
DNase-seq
1
ATAC-seq
Available data
5
bed bed3+
2
bigWig
File set status
5
released
Genome assembly (visualization)
5
hg19
2
GRCh38
Organism
5
Homo sapiens
Biosample type
primary cell
5
tissue
Biosample term
24
retina
20
pigmented layer of retina
11
kidney
10
neural progenitor cell
9
EndoC_BH1
7
heart
7
islet of Langerhans
6
SGBS preadipocytes
6
embryonic stem cell
6
pancreas
6
retinal pigment epithelial cell
5
chondrocyte
5
coronary artery
5
heart left ventricle
5
right atrium auricular region
5
tibial artery
5
tibial nerve
4
Pancreatic progenitors (progenitor cell of endocrine pancreas)
4
adipocyte
4
liver
3
adipose tissue
3
brain
3
caudate nucleus
3
frontal cortex
3
globus pallidus
3
medulla oblongata
3
midbrain
3
occipital lobe
3
pons
3
putamen
3
renal pelvis
3
stomach
3
subcutaneous adipose tissue
3
superior temporal gyrus
2
hindlimb muscle
2
muscle of leg
2
Ammon's horn
2
B cell
2
HepG2
2
MIN6
2
Rh-4 cell
2
adipose-derived stem cell
2
ascending aorta
2
differentiating adipose-derived stem cell
2
fibroblast of cardiac tissue
2
glomerular visceral epithelial cell
2
heart right ventricle
2
left cardiac atrium
2
left renal cortex interstitium
2
left renal pelvis
2
middle frontal gyrus
2
muscle of arm
2
muscle of leg
2
omental fat pad
2
pancreatic ductal cell
2
pancreatic stellate cell
2
renal cortex interstitium
2
right kidney
2
right renal cortex interstitium
2
right renal pelvis
2
spinal cord
2
spleen
2
thoracic aorta
1
left kidney
1
omental fat pad
1
786-O cell
1
A-673 cell
1
A172
1
A549
1
ACHN
1
AG04449 cell
1
AG04450 cell
1
AG08396 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
Adipose SGBS cell line (adipocyte)
1
BE(2)-C
1
BJ cell
1
CD4-positive helper T cell
1
CD8-positive, alpha-beta T cell
1
CMK
1
COLO-829 cell
1
COLO205
1
Caco-2 cell
1
Caki2
1
D341 Med cell
1
DG-75 cell
1
Daoy
1
ECC-1
1
G-401 cell
1
GM03348
1
GM04503
1
GM04504
1
GM06990
1
GM10248
1
GM10266
1
GM12864
1
GM12865
1
GM12878
1
GM13976
1
GM13977
1
GM18507
1
GM19240
1
GM20000
1
GM23248
1
GP5d
1
H1-hESC
1
H4
1
H7-hESC
1
HAC cell
1
HAP-1
1
HBMEC cell
1
HCT-116 cell
1
HEK293
1
HGF
1
HL-60
1
HT-29
1
HUES6
1
HUES8
1
HeLa cell
1
Hodgkin lymphoma cell line
1
HuH-7
1
HuTu-80 cell
1
IMR-90
1
Jurkat
1
K562
1
KARPAS-422 cell
1
KBM-7
1
Kasumi-1
1
L-1236 cell
1
L-428 cell
1
L1-S8
1
L1-S8R
1
LHCN-M2
1
LNCAP
1
LoVo cell
1
M059J
1
MCF-7
1
MCF10A-Er-Src cell
1
MDA-MB-231 cell
1
MG63
1
MM.1S
1
MOLM-13 cell
1
Myoblasts
1
NAMALWA cell
1
NB-4 cell
1
NCCIT cell
1
NCI-H226 cell
1
NHBE cell
1
NHDF cell
1
NHEK
1
NT2-D1 cell
1
Normal Human Astrocytes
1
OCI-AML3
1
OCI-LY7
1
PA-TU-8988T cell
1
PANC-1 cell
1
PC-3
1
PC-9
1
Peyer's patch
1
Preadipose SGBS cell line (adipocyte)
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
RCC 7860
1
REH cell
1
RKO
1
RPMI7951
1
RPMI8226
1
RS4-11 cell
1
RWPE1
1
Rh-5 cell
1
Rhabdomyosarcoma
1
SAEC
1
SJCRH30
1
SJSA1
1
SK-CO-1
1
SK-N-DZ
1
SK-N-MC
1
SK-N-SH_RA
1
SKH1-Hr hr
1
SKMC
1
SUDHL5
1
SW1116
1
SW480
1
Saos-2 cell
1
Schwann cell
1
T cell
1
T-47D cell
1
T84
1
U-266 cell
1
U-87 MG
1
U2OS
1
U937
1
WERI-Rb-1
1
WI-38 cell
1
Z-138
1
ZR-75-1 cell
1
acute myeloid leukemia
1
adipose-derived mesenchymal stem cell
1
adrenal gland
Organ
3
brain
2
spleen
Life stage
1
fetal
Date released
2
June, 2020
1
January, 2020
1
May, 2020
1
November, 2019
Software used
4
macs
1
deltasvm
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
biosample_type!
primary cell
Showing 5 of 5 results
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Download
FileSet
DSR346XCX
released
Annotation file set
: Accessible chromatin annotation for Others Spleen from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR147QJJ
released
Annotation file set
: Accessible chromatin annotation for Neural Fetal brain from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR154FEP
released
Annotation file set
: Genetic variants with deltaSVM predictions in brain DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR271FEH
released
Annotation file set
: Accessible chromatin annotation of brain fetal from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR188AUG
released
Annotation file set
: Accessible chromatin annotation of spleen
Lab:
AMP-T2D consortium
Project:
AMP