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Citing CMDGA
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Annotation type
5
target gene predictions
4
binding sites
3
candidate regulatory elements
3
chromatin state
3
histone modifications
2
accessible chromatin
1
variant allelic effects
Annotation Category
2
cis-regulatory elements
1
Genetic variant effects
Annotation type Category
3
snATAC-seq
Available data
3
bed bed3+
2
bigWig
File set status
3
released
Genome assembly (visualization)
3
hg19
2
GRCh38
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
3
keratinocyte
3
skin fibroblast
1
GM23248
1
RPMI7951
1
basal cell of epidermis
1
dermis microvascular lymphatic vessel endothelial cell
1
foreskin fibroblast
1
foreskin keratinocyte
1
granular cell of epidermis
1
iPS DF 4.7 Cell Line
Organ
3
epithelium
3
skin of body
Date released
2
November, 2021
1
February, 2024
Software used
2
macs
1
deltasvm
Lab
3
Bing Ren, UCSD
Project
2
ENCODE
1
AMP
RFA
2
ENCODE3
1
AMP
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FileSet
DSR919NQU
released
Annotation file set
: Accessible chromatin annotation of Keratinocyte 2 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR774OBV
released
Annotation file set
: Accessible chromatin annotation of Keratinocyte 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR684JHV
released
Annotation file set
: Variant allelic effects annotation of Keratinocytes from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP