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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
3
Fine-mapped variants
3
accessible chromatin
3
candidate regulatory elements
2
chromatin state
2
target gene predictions
2
variant allelic effects
1
eQTL
1
gene expression
Annotation Category
3
cis-regulatory elements
2
Genetic variant effects
Annotation type Category
3
DNase-seq
2
ATAC-seq
Available data
5
bed bed3+
2
bigWig
File set status
5
released
Genome assembly (visualization)
5
hg19
2
GRCh38
Organism
5
Homo sapiens
Biosample type
5
tissue
Biosample term
22
fibroblast
18
endothelial cell
18
monocyte
16
macrophage
13
excitatory neuron
11
kidney
11
smooth muscle cell
10
hepatocyte
10
neural progenitor cell
10
pericyte cell
9
EndoC_BH1
9
T cell
9
pancreatic beta cell
9
pancreatic ductal cell
8
B cell
8
astrocyte
8
islet of Langerhans
8
pancreatic acinar cell
8
pancreatic alpha cell
7
adipocyte
7
heart
7
skeletal muscle fiber
6
SGBS preadipocytes
6
embryonic stem cell
6
endothelial cell of hepatic sinusoid
6
enterocyte
6
glutamatergic neuron
6
pancreas
6
pancreatic delta cell
5
cardiac fibroblast
5
CD8-positive, alpha-beta T cell
5
chondrocyte
5
coronary artery
5
erythroblast
5
heart left ventricle
5
inhibitory neuron
5
osteoblast
5
regulatory T cell
5
right atrium auricular region
5
skeletal muscle satellite cell
5
tibial artery
5
tibial nerve
5
type II pneumocyte
4
Pancreatic progenitors (progenitor cell of endocrine pancreas)
4
basal cell
4
cardiac muscle cell
4
cortical cell of adrenal gland
4
fibroblast of cardiac tissue
4
glomerular visceral epithelial cell
4
hepatic stellate cell
4
liver
4
memory B cell
4
myofibroblast cell
4
natural killer cell
4
pancreatic stellate cell
3
Schwann cell
3
T-helper 1 cell
3
adipose tissue
3
brain
3
brain pericyte
3
caudate nucleus
3
choroid plexus epithelial cell
3
colon epithelial cell
3
endothelial cell of lymphatic vessel
3
endothelial cell of umbilical vein
3
frontal cortex
3
gabaergic neuron
3
globus pallidus
3
glomerular endothelial cell
3
goblet cell
3
keratinocyte
3
kidney glomerular epithelial cell
3
mammary gland epithelial cell
3
medulla oblongata
3
mesenchymal stem cell
3
mesothelial cell
3
midbrain
3
naive B cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
occipital lobe
3
pancreatic polypeptide-secreting cell
3
pons
3
putamen
3
renal cortical epithelial cell
3
renal pelvis
3
skeletal muscle myoblast
3
skin fibroblast
3
stomach
3
subcutaneous adipose tissue
3
superior temporal gyrus
3
type I muscle cell
3
type I pneumocyte
3
type II muscle cell
2
hindlimb muscle
2
muscle of leg
2
Ammon's horn
2
CD4-positive helper T cell
2
HepG2
2
MIN6
2
Rh-4 cell
2
T follicular helper cell
2
T-helper 17 cell
2
T-helper 2 cell
2
acute myeloid leukemia cell
2
adipose-derived stem cell
2
aortic endothelial cell
2
ascending aorta
2
astrocyte of the cerebellum
2
astrocyte of the hippocampus
2
blood vessel smooth muscle cell
2
bone marrow cell
2
capillary endothelial cell
2
central memory CD8-positive, alpha-beta T cell
2
ciliated cell
2
club cell
2
differentiating adipose-derived stem cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
endocardial cell
2
enteric neuron
2
enteric smooth muscle cell
2
epithelial cell of esophagus
2
epithelial cell of proximal tubule
2
erythroid cell
2
extracellular matrix secreting cell
2
fetal cardiomyocyte
2
gamma-delta T cell
2
glial cell
2
heart right ventricle
2
kidney capillary endothelial cell
2
kidney epithelial cell
2
kidney tubule cell
2
left cardiac atrium
2
left renal cortex interstitium
2
left renal pelvis
2
leukocyte
2
luminal epithelial cell of mammary gland
2
mast cell
2
mature natural killer cell
2
megakaryocyte
2
memory T cell
2
memory regulatory T cell
2
mesangial cell
2
middle frontal gyrus
2
muscle of arm
2
muscle of leg
2
naive regulatory T cell
2
naive t cell
2
neuron
2
oligodendrocyte
2
oligodendrocyte precursor cell
2
omental fat pad
2
parietal cell
2
peptic cell
2
plasma cell
2
plasmacytoid dendritic cell
2
renal cortex interstitium
2
right kidney
2
right renal cortex interstitium
2
right renal pelvis
2
schwann cell
2
skeletal muscle cell
2
smooth muscle cell of the brain vasculature
2
smooth muscle cell of the esophagus
2
spinal cord
2
spleen
2
thoracic aorta
2
thyroid follicular cell
2
vascular associated smooth muscle cell
1
brain microvascular endothelial cell
1
left kidney
1
omental fat pad
1
786-O cell
1
A-673 cell
1
A172
1
A549
1
ACHN
1
AG04449 cell
1
AG04450 cell
1
AG08396 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
Adipose SGBS cell line (adipocyte)
1
B-Lymphocytes
1
B-lymphocyte
1
BE(2)-C
1
BJ cell
1
CD1c-positive myeloid dendritic cell
1
CD4-Positive T-Lymphocytes
1
CD4-positive, alpha-beta T cell
1
CMK
1
COLO-829 cell
1
COLO205
1
Caco-2 cell
1
Caki2
1
D341 Med cell
1
DG-75 cell
1
Daoy
Organ
5
heart
Life stage
1
adult
Date released
2
May, 2020
1
January, 2020
1
June, 2020
1
November, 2019
Software used
3
macs
2
deltasvm
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
month_released!
February, 2020
organ_slims!
eye
Showing 5 of 5 results
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Download
FileSet
DSR260GGW
released
Annotation file set
: Accessible chromatin annotation for Cardiovascular Right atrium auricular region from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR272CDU
released
Annotation file set
: Genetic variants with deltaSVM predictions in heart right atrium auricular region ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR802GWP
released
Annotation file set
: Genetic variants with deltaSVM predictions in heart right atrium auricular region DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR699UWM
released
Annotation file set
: Accessible chromatin annotation of heart right atrium auricular region from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR521SIB
released
Annotation file set
: Accessible chromatin annotation of right atrium auricular region
Lab:
AMP-T2D consortium
Project:
AMP