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Schema
Citing CMDGA
Clear Filters
Annotation type
55
target gene predictions
9
candidate regulatory elements
4
binding sites
4
chromatin state
3
accessible chromatin
2
gene expression
2
histone modifications
1
eQTL
Annotation Category
3
cis-regulatory elements
Annotation type Category
2
DNase-seq
1
snATAC-seq
Available data
3
bed bed3+
1
bigWig
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
2
primary cell
1
tissue
Biosample term
1
Ishikawa
1
uterine smooth muscle cell
1
uterus
Organ
154
epithelium
71
connective tissue
46
pancreas
41
brain
kidney
27
musculature of body
25
vasculature
21
intestine
20
heart
15
blood vessel
15
lung
13
limb
13
skin of body
12
blood
12
bodily fluid
12
embryo
12
eye
11
liver
10
large intestine
9
extraembryonic component
8
bone element
8
lymph node
8
stomach
7
adrenal gland
7
mammary gland
5
artery
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
penis
3
small intestine
3
uterus
2
adipose tissue
2
bone marrow
2
lymphoid tissue
2
nerve
2
ovary
2
spinal cord
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
skeleton
1
spleen
1
tongue
1
trachea
1
urinary bladder
Date released
2
June, 2020
1
November, 2021
Software used
3
macs
Lab
2
AMP-T2D consortium
1
Bing Ren, UCSD
Project
2
AMP
1
ENCODE
RFA
2
AMP
1
ENCODE3
annotation_type_category!
ATAC-seq
organ_slims!
kidney
Showing 3 of 3 results
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Download
FileSet
DSR680BYM
released
Annotation file set
: Accessible chromatin annotation of Smooth Muscle (Uterine) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR373YCF
released
Annotation file set
: Accessible chromatin annotation for Uterus Uterus from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR250RSS
released
Annotation file set
: Accessible chromatin annotation for Uterus Ishikawa from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP