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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
16
chromatin state
2
accessible chromatin
2
histone modifications
1
binding sites
Annotation Category
2
cis-regulatory elements
Annotation type Category
DNase-seq
2
ATAC-seq
File set status
2
released
Organism
2
Homo sapiens
Biosample type
2
in vitro differentiated cells
Biosample term
21
retina
20
pigmented layer of retina
16
monocyte
14
fibroblast
13
endothelial cell
13
excitatory neuron
11
macrophage
10
neural progenitor cell
10
pericyte cell
8
EndoC_BH1
8
astrocyte
8
pancreatic beta cell
7
pancreatic acinar cell
7
pancreatic alpha cell
7
pancreatic ductal cell
7
retinal pigment epithelial cell
7
smooth muscle cell
6
B cell
6
glutamatergic neuron
6
islet of Langerhans
5
SGBS preadipocytes
5
T cell
5
chondrocyte
5
embryonic stem cell
5
erythroblast
5
inhibitory neuron
5
pancreatic delta cell
4
CD8-positive, alpha-beta T cell
4
adipocyte
4
memory B cell
4
pancreatic stellate cell
4
skeletal muscle satellite cell
4
type II pneumocyte
3
colon epithelial cell
3
cortical cell of adrenal gland
3
endothelial cell of lymphatic vessel
3
enterocyte
3
gabaergic neuron
3
liver
3
naive B cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
natural killer cell
3
regulatory T cell
3
skeletal muscle fiber
3
type I pneumocyte
2
Muller cell
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
T follicular helper cell
2
T-helper 1 cell
2
T-helper 17 cell
2
T-helper 2 cell
2
adipose tissue
2
adipose-derived stem cell
2
aortic endothelial cell
2
basal cell
2
blood vessel smooth muscle cell
2
capillary endothelial cell
2
central memory CD8-positive, alpha-beta T cell
2
ciliated cell
2
club cell
2
coronary artery
2
differentiating adipose-derived stem cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
endocardial cell
2
endothelial cell of hepatic sinusoid
2
enteric neuron
2
enteric smooth muscle cell
2
extracellular matrix secreting cell
2
fetal cardiomyocyte
2
fibroblast of cardiac tissue
2
gamma-delta T cell
2
keratinocyte
2
luminal epithelial cell of mammary gland
2
mature natural killer cell
2
megakaryocyte
2
memory T cell
2
memory regulatory T cell
2
mesangial cell
2
mesothelial cell
2
naive regulatory T cell
2
neuron
2
oligodendrocyte
2
oligodendrocyte precursor cell
2
osteoblast
2
pancreatic polypeptide-secreting cell
2
plasma cell
2
plasmacytoid dendritic cell
2
schwann cell
2
smooth muscle cell of the esophagus
2
subcutaneous adipose tissue
2
type I muscle cell
2
type II muscle cell
1
CD4-positive helper T cell
1
CD4-positive, alpha-beta T cell
1
HepG2
1
Schwann cell
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
alveolar macrophage
1
basal cell of epidermis
1
cardiac endothelial cell
1
cardiac muscle cell
1
cardiac precursors
1
cholangiocyte
1
chromaffin cell of adrenal gland
1
ciliated epithelial cell
colon goblet cell
1
conventional dendritic cell
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
eccrine cell
1
endothelial cell of artery
1
enterochromaffin-like cell
1
enterocyte of epithelium of small intestine
1
enteroendocrine cell
1
erythrocyte
1
extravillous trophoblast
1
fetal thymocyte
1
foveolar cell of stomach
1
gastric goblet cell
1
glial cell
1
goblet cell
1
granular cell of epidermis
1
heart
1
heart left ventricle
1
hepatic stellate cell
1
hepatoblast
1
hepatocyte
1
hippocampal neuron
1
immature natural killer cell
1
intestinal tuft cell
1
kidney glomerular epithelial cell
1
leukocyte
1
lower motor neuron
1
lung neuroendocrine cell
1
luteal cell
1
mammary gland epithelial cell
1
mast cell
1
mature NK T cell
1
melanocyte
1
mesenchymal stem cell
1
metanephros
1
microglial cell
1
microglial cell/astrocyte
1
myeloid dendritic cell
1
myoepithelial cell
1
myofibroblast cell
1
naive t cell
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
natural killer cell mediated cytotoxicity
1
neuroendocrine cell
1
non keratinizing barrier epithelial cell
1
non-classical monocyte
1
non-neuronal cell
1
omental fat pad
1
pancreas
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic endothelial cell
1
pancreatic immune cell
1
paneth cell
1
parietal cell
1
parietal epithelial cell
1
peptic cell
1
peripheral neuron
1
photoreceptor cell
1
placental hematopoietic stem cell
1
placental villus capillary endothelial cell
1
preadipocyte
1
proximal epiphysis
1
proximal epiphysis of femur
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
1
regular atrial cardiac myocyte
1
respiratory goblet cell
1
retinal bipolar neuron
1
right atrium auricular region
1
skeletal muscle fibroblast
1
skin fibroblast
1
small intestine goblet cell
1
smooth muscle cell of the coronary artery
1
spleen
1
stellate neuron
1
stomach neuroendocrine cell
1
stromal cell
1
sympathetic neuron
1
thoracic aorta
1
thyroid follicular cell
1
tibial artery
1
tibial nerve
1
tissue-resident macrophage
1
trophoblast giant cell
1
type B pancreatic cell
1
type I cell of adrenal cortex
1
type II cell of adrenal cortex
Date released
2
February, 2024
Software used
2
macs
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
AMP2
2
AMP
annotation_type_category!
DNase-seq
award.rfa!
AMP2
biosample_term_name!
colon goblet cell
Showing 2 of 2 results
table-tab-icon
matrix-icon
FileSet
DSR059ZYM
released
Annotation file set
: Accessible chromatin of differentiating adipose-derived stem cells, 8 hour
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR075MLB
released
Annotation file set
: Accessible chromatin of differentiating adipose-derived stem cells, 2 hour
Lab:
AMP-T2D consortium
Project:
AMP