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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
16
target gene predictions
7
chromatin state
2
accessible chromatin
2
binding sites
1
histone modifications
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ATAC-seq
DNase-seq
File set status
2
released
Organism
2
Homo sapiens
Biosample type
2
in vitro differentiated cells
Biosample term
21
retina
20
pigmented layer of retina
16
endothelial cell
16
fibroblast
16
monocyte
13
excitatory neuron
12
macrophage
10
neural progenitor cell
10
pericyte cell
9
smooth muscle cell
8
EndoC_BH1
8
astrocyte
8
pancreatic beta cell
7
kidney
7
pancreatic acinar cell
7
pancreatic alpha cell
7
pancreatic ductal cell
7
retinal pigment epithelial cell
6
B cell
6
T cell
6
embryonic stem cell
6
endothelial cell of hepatic sinusoid
6
glutamatergic neuron
6
hepatocyte
6
islet of Langerhans
5
SGBS preadipocytes
5
adipocyte
5
chondrocyte
5
erythroblast
5
inhibitory neuron
5
pancreatic delta cell
5
skeletal muscle fiber
5
skeletal muscle satellite cell
4
CD8-positive, alpha-beta T cell
4
memory B cell
4
pancreatic stellate cell
4
type II pneumocyte
3
colon epithelial cell
3
cortical cell of adrenal gland
3
endothelial cell of lymphatic vessel
3
enterocyte
3
gabaergic neuron
3
liver
3
naive B cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
natural killer cell
3
regulatory T cell
3
type I muscle cell
3
type I pneumocyte
3
type II muscle cell
2
Muller cell
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
T follicular helper cell
2
T-helper 1 cell
2
T-helper 17 cell
2
T-helper 2 cell
2
adipose tissue
2
adipose-derived stem cell
2
aortic endothelial cell
2
basal cell
2
blood vessel smooth muscle cell
2
capillary endothelial cell
2
central memory CD8-positive, alpha-beta T cell
2
ciliated cell
2
club cell
2
coronary artery
2
differentiating adipose-derived stem cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
endocardial cell
2
enteric neuron
2
enteric smooth muscle cell
2
extracellular matrix secreting cell
2
fetal cardiomyocyte
2
fibroblast of cardiac tissue
2
gamma-delta T cell
2
glial cell
2
keratinocyte
2
leukocyte
2
luminal epithelial cell of mammary gland
2
mature natural killer cell
2
megakaryocyte
2
memory T cell
2
memory regulatory T cell
2
mesangial cell
2
mesenchymal stem cell
2
mesothelial cell
2
naive regulatory T cell
2
neuron
2
oligodendrocyte
2
oligodendrocyte precursor cell
2
osteoblast
2
pancreatic polypeptide-secreting cell
2
plasma cell
2
plasmacytoid dendritic cell
2
schwann cell
2
smooth muscle cell of the esophagus
2
subcutaneous adipose tissue
1
CD4-positive helper T cell
1
CD4-positive, alpha-beta T cell
1
HepG2
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
Schwann cell
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
alveolar macrophage
1
basal cell of epidermis
1
cardiac endothelial cell
1
cardiac muscle cell
1
cardiac precursors
1
cholangiocyte
1
chromaffin cell of adrenal gland
1
ciliated epithelial cell
1
colon goblet cell
1
conventional dendritic cell
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
eccrine cell
1
endothelial cell of artery
1
enterochromaffin-like cell
1
enterocyte of epithelium of small intestine
1
enteroendocrine cell
1
erythrocyte
1
extravillous trophoblast
1
fetal thymocyte
1
foveolar cell of stomach
1
gastric goblet cell
1
glomerular visceral epithelial cell
1
goblet cell
1
granular cell of epidermis
1
heart
1
heart left ventricle
1
hepatic stellate cell
1
hepatoblast
1
hippocampal neuron
1
immature natural killer cell
1
intestinal tuft cell
1
kidney distal convoluted tubule epithelial cell
1
kidney glomerular epithelial cell
1
kidney interstitial cell
1
kidney loop of Henle epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal convoluted tubule epithelial cell & kidney proximal straight tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
lower motor neuron
1
lung neuroendocrine cell
1
luteal cell
1
lymphocyte(CL:0000542) and natural killer cell(CL:0000623)
1
macrophage(CL:0000235) and neutrophil(CL:0000775)
1
mammary gland epithelial cell
1
mast cell
1
mature NK T cell
1
melanocyte
1
metanephros
1
microglial cell
1
microglial cell/astrocyte
1
myeloid dendritic cell
1
myoepithelial cell
1
myofibroblast cell
1
naive t cell
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
natural killer cell mediated cytotoxicity
neural cell
1
neuroendocrine cell
1
neuron cell of Hypothalamus (neuron)
1
non keratinizing barrier epithelial cell
1
non-classical monocyte
1
non-neuronal cell
1
omental fat pad
1
pancreas
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic endothelial cell
1
pancreatic immune cell
1
paneth cell
1
parietal cell
1
parietal epithelial cell
1
peptic cell
1
peripheral neuron
1
photoreceptor cell
1
placental hematopoietic stem cell
1
placental villus capillary endothelial cell
1
preadipocyte
1
proximal epiphysis
1
proximal epiphysis of femur
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
1
proximal tubule cells with injury markers
1
regular atrial cardiac myocyte
1
renal intercalated cell
1
renal principal cell
1
respiratory goblet cell
1
retinal bipolar neuron
1
right atrium auricular region
1
skeletal muscle fibroblast
1
skin fibroblast
Date released
2
February, 2024
Software used
2
macs
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
annotation_type_category!
DNase-seq
biosample_term_name!
AG09309 cell
neural cell
Showing 2 of 2 results
table-tab-icon
matrix-icon
FileSet
DSR059ZYM
released
Annotation file set
: Accessible chromatin of differentiating adipose-derived stem cells, 8 hour
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR075MLB
released
Annotation file set
: Accessible chromatin of differentiating adipose-derived stem cells, 2 hour
Lab:
AMP-T2D consortium
Project:
AMP