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Schema
Citing CMDGA
Clear Filters
Annotation type
16
chromatin state
7
accessible chromatin
7
gene expression
2
histone modifications
1
binding sites
1
eQTL
Annotation Category
7
cis-regulatory elements
Annotation type Category
7
ATAC-seq
DNase-seq
Available data
7
bed bed3+
7
bigWig
File set status
7
released
Genome assembly (visualization)
7
GRCh38
7
hg19
Organism
7
Homo sapiens
Biosample type
7
tissue
primary cell
Biosample term
21
retina
20
pigmented layer of retina
10
neural progenitor cell
8
EndoC_BH1
7
kidney
6
embryonic stem cell
6
retinal pigment epithelial cell
5
SGBS preadipocytes
5
chondrocyte
5
islet of Langerhans
3
adipocyte
3
liver
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
adipose tissue
2
adipose-derived stem cell
2
coronary artery
2
differentiating adipose-derived stem cell
2
pancreatic ductal cell
2
pancreatic stellate cell
2
subcutaneous adipose tissue
1
HepG2
1
Progenitor cell of Hypothalamus (neural progenitor cell)
Schwann cell
1
cardiac muscle cell
1
cardiac precursors
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
endothelial cell
1
excitatory neuron
1
heart
1
heart left ventricle
1
hippocampal neuron
1
lower motor neuron
1
neuron cell of Hypothalamus (neuron)
1
omental fat pad
1
pancreas
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic acinar cell
1
proximal epiphysis
1
proximal epiphysis of femur
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
1
right atrium auricular region
1
smooth muscle cell of the coronary artery
1
spleen
1
thoracic aorta
1
tibial artery
1
tibial nerve
1
tissue-resident macrophage
1
type B pancreatic cell
Disease term
2
diabetes mellitus,hypertensive disorder
1
chronic kidney disease
1
hypertensive disorder
1
hypertensive disorder, chronic kidney disease
Organ
7
kidney
Date released
7
August, 2021
Software used
7
macs
Lab
7
Katalin Susztak, Upenn
Project
7
AMP
RFA
7
AMP2
annotation_type_category!
DNase-seq
biosample_term_name!
Schwann cell
biosample_type!
primary cell
Showing 7 of 7 results
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Download
FileSet
DSR016ZOX
released
Annotation file set
: Accessible chromatin of kidney from Katalin Susztak 75kidney Project ATAC-seq
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR073KQB
released
Annotation file set
: Accessible chromatin of kidney from Katalin Susztak 75kidney Project ATAC-seq for hypertension group
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR880LWO
released
Annotation file set
: Accessible chromatin of kidney from Katalin Susztak 75kidney Project ATAC-seq for diabetes mellitus/Hypertension group
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR772HPX
released
Annotation file set
: Accessible chromatin of kidney from Katalin Susztak 75kidney Project ATAC-seq for diabetic kidney disease/Hypertension group
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR307LRO
released
Annotation file set
: Accessible chromatin of kidney from Katalin Susztak 75kidney Project ATAC-seq for control group
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR574ZEL
released
Annotation file set
: Accessible chromatin of kidney from Katalin Susztak 75kidney Project ATAC-seq for chronic kidney disease/hypertension group
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR937TUB
released
Annotation file set
: Accessible chromatin of kidney from Katalin Susztak 75kidney Project ATAC-seq for chronic kidney disease group
Lab:
Katalin Susztak, Upenn
Project:
AMP