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Citing CMDGA
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Annotation type
6
candidate regulatory elements
5
chromatin state
5
target gene predictions
2
accessible chromatin
2
binding sites
1
gene expression
1
variant allelic effects
Annotation Category
2
cis-regulatory elements
Annotation type Category
snATAC-seq
2
DNase-seq
Available data
2
bed bed3+
1
bigWig
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
17
monocyte
7
hepatocyte
5
osteoblast
4
endothelial cell of hepatic sinusoid
4
glutamatergic neuron
4
regulatory T cell
3
cardiac fibroblast
3
T-helper 1 cell
2
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
T-helper 17 cell
2
T-helper 2 cell
2
acute myeloid leukemia cell
2
aortic endothelial cell
2
bone marrow cell
2
central memory CD8-positive, alpha-beta T cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
endothelial cell of umbilical vein
2
gamma-delta T cell
2
glomerular endothelial cell
2
glomerular visceral epithelial cell
2
hepatic stellate cell
2
kidney glomerular epithelial cell
2
kidney tubule cell
2
mature natural killer cell
2
memory B cell
2
memory T cell
2
memory regulatory T cell
2
naive B cell
2
naive regulatory T cell
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
pancreatic beta cell
2
pancreatic ductal cell
2
renal cortical epithelial cell
2
retinal pigment epithelial cell
2
skeletal muscle myoblast
1
B-Lymphocytes
1
B-lymphocyte
1
CD1c-positive myeloid dendritic cell
1
CD4-Positive T-Lymphocytes
1
CD4-positive helper T cell
1
Glioblastoma
1
Ishikawa
1
Th1 cell
1
Th17 cell
1
Th2 cell
1
aortic adventitial fibroblast
1
astrocyte
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain microvascular endothelial cell
1
brain pericyte
1
bronchial epithelial cell
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
dedifferentiated amniotic fluid mesenchymal stem cell
1
endothelial cell
1
epithelial cell of proximal tubule
1
erythroid cell
1
fibroblast of mammary gland
1
fibroblast of peridontal ligament
1
fibroblast of pulmonary artery
1
fibroblast of villous mesenchyme
1
foreskin fibroblast
1
gabaergic neuron
1
immature natural killer cell
1
iris pigment epithelial cell
1
kidney capillary endothelial cell
1
kidney epithelial cell
1
kidney interstitial cell
1
kidney loop of Henle epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
mammary epithelial cell
1
microglial cell/astrocyte
1
myeloid dendritic cell
1
natural killer cell
1
neoplastic cell
1
neuron
1
non-neuronal cell
1
non-pigmented ciliary epithelial cell
1
oligodendrocyte
1
pancreatic acinar cell
1
pancreatic alpha cell
1
peripheral blood stem cell
1
plasma cell
1
plasmacytoid dendritic cell
1
preadipocyte
1
primordial germ cell
1
pulmonary artery endothelial cell
1
pulmonary interstitial fibroblast
1
renal epithelial cell
1
renal intercalated cell
1
renal principal cell
1
skeletal muscle cell
1
skin fibroblast
1
smooth muscle cell of the brain vasculature
1
somatic gonadal cell
1
tracheal epithelial cell
1
trophoblast cell
Organ
2
blood vessel
2
epithelium
2
vasculature
2
vein
Life stage
1
newborn
Date released
1
June, 2020
1
May, 2020
Software used
1
macs
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
annotation_type_category!
snATAC-seq
Showing 2 of 2 results
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Download
FileSet
DSR690SAR
released
Annotation file set
: Accessible chromatin annotation for Cardiovascular HUVEC from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR603NLX
released
Annotation file set
: Accessible chromatin of endothelial cell of umbilical vein ENCODE DHSseq
Lab:
AMP-T2D consortium
Project:
AMP