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Schema
Citing CMDGA
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Annotation type
3
candidate regulatory elements
1
accessible chromatin
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
ATAC-seq
1
snATAC-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
2
fibroblast
1
T cell
1
endothelial cell
1
kidney distal convoluted tubule epithelial cell
1
kidney proximal convoluted tubule epithelial cell & kidney proximal straight tubule epithelial cell
1
lymphocyte(CL:0000542) and natural killer cell(CL:0000623)
1
macrophage
1
macrophage(CL:0000235) and neutrophil(CL:0000775)
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
pancreatic delta cell
1
pancreatic ductal cell
1
pancreatic endothelial cell
1
pancreatic immune cell
1
pancreatic polypeptide-secreting cell
1
pancreatic stellate cell
1
proximal tubule cells with injury markers
1
smooth muscle cell
0
D341 Med cell
Organ
1
epithelium
Life stage
1
adult
1
unknown
Date released
1
May, 2022
Software used
1
macs
Lab
1
Bing Ren, UCSD
Project
1
AMP
RFA
1
AMP2
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Download
FileSet
DSR426RPD
released
Annotation file set
: Accessible chromatin annotation of Endothelial cells from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP