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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
30
histone modifications
7
candidate regulatory elements
3
gene expression
3
target gene predictions
2
accessible chromatin
1
chromatin state
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ATAC-seq
Available data
2
bed bed3+
2
bigWig
File set status
2
released
Genome assembly (visualization)
3
hg19
GRCh38
Biosample type
2
primary cell
Biosample term
21
retina
20
pigmented layer of retina
7
EndoC_BH1
6
embryonic stem cell
6
retinal pigment epithelial cell
5
SGBS preadipocytes
5
chondrocyte
4
adipocyte
4
glutamatergic neuron
3
B cell
3
endothelial cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
T-helper 1 cell
2
T-helper 17 cell
2
T-helper 2 cell
2
adipose tissue
2
adipose-derived stem cell
2
aortic endothelial cell
2
capillary endothelial cell
2
central memory CD8-positive, alpha-beta T cell
2
differentiating adipose-derived stem cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
extracellular matrix secreting cell
2
gamma-delta T cell
2
leukocyte
2
mature natural killer cell
2
memory B cell
2
memory T cell
2
memory regulatory T cell
2
mesenchymal stem cell
2
monocyte
2
naive B cell
2
naive regulatory T cell
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
natural killer cell
2
pancreatic alpha cell
2
pancreatic beta cell
2
pancreatic delta cell
2
regulatory T cell
2
skeletal muscle fiber
2
skeletal muscle satellite cell
2
smooth muscle cell
2
type I muscle cell
2
type II muscle cell
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
T cell
1
basal cell
1
ciliated cell
1
club cell
1
endothelial cell of artery
1
endothelial cell of lymphatic vessel
1
erythrocyte
1
gabaergic neuron
1
glial cell
1
glomerular visceral epithelial cell
1
immature natural killer cell
1
islet of Langerhans
1
kidney distal convoluted tubule epithelial cell
1
kidney interstitial cell
1
kidney loop of Henle epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal convoluted tubule epithelial cell & kidney proximal straight tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
liver
1
lymphocyte(CL:0000542) and natural killer cell(CL:0000623)
1
macrophage
1
macrophage(CL:0000235) and neutrophil(CL:0000775)
1
microglial cell/astrocyte
1
myeloid dendritic cell
1
myofibroblast cell
1
neural cell
1
neuroendocrine cell
1
neuron
1
neuron cell of Hypothalamus (neuron)
1
non-neuronal cell
1
oligodendrocyte
1
pancreatic acinar cell
1
pancreatic ductal cell
1
pancreatic endothelial cell
1
pancreatic immune cell
1
pancreatic polypeptide-secreting cell
1
pancreatic stellate cell
1
pericyte cell
1
plasma cell
1
plasmacytoid dendritic cell
1
preadipocyte
1
proximal tubule cells with injury markers
1
renal intercalated cell
1
renal principal cell
1
skeletal muscle myoblast
1
type I pneumocyte
1
type II pneumocyte
Date released
2
May, 2020
January, 2021
June, 2020
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
assembly!
GRCh38
month_released!
January, 2021
June, 2020
organ_slims!
placenta
Showing 2 of 2 results
table-tab-icon
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Download
FileSet
DSR590HEP
released
Annotation file set
: GSE118189 ATACseq accessible chromatin of normal CD8-positive, alpha-beta T cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR935PWD
released
Annotation file set
: GSE118189 ATACseq accessible chromatin of LPS-stimulated CD8-positive, alpha-beta T cell
Lab:
AMP-T2D consortium
Project:
AMP