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Schema
Citing CMDGA
Clear Filters
Annotation type
4
binding sites
3
candidate regulatory elements
3
histone modifications
1
accessible chromatin
1
chromatin state
1
gene expression
1
target gene predictions
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
snATAC-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
2
hg19
GRCh38
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
4
endothelial cell
4
glutamatergic neuron
4
pancreatic alpha cell
4
pancreatic beta cell
4
pancreatic delta cell
3
B cell
3
CD8-positive, alpha-beta T cell
3
memory B cell
3
monocyte
3
naive B cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
natural killer cell
3
regulatory T cell
2
T follicular helper cell
2
T-helper 1 cell
2
T-helper 17 cell
2
T-helper 2 cell
2
aortic endothelial cell
2
capillary endothelial cell
2
central memory CD8-positive, alpha-beta T cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
extracellular matrix secreting cell
2
gamma-delta T cell
2
leukocyte
2
macrophage
2
mature natural killer cell
2
memory T cell
2
memory regulatory T cell
2
mesenchymal stem cell
2
naive regulatory T cell
2
pancreatic acinar cell
2
pancreatic ductal cell
2
pancreatic polypeptide-secreting cell
2
pancreatic stellate cell
2
plasmacytoid dendritic cell
2
skeletal muscle fiber
2
skeletal muscle satellite cell
2
smooth muscle cell
2
type I muscle cell
2
type II muscle cell
1
T cell
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
adipocyte
1
basal cell
1
ciliated cell
1
club cell
1
conventional dendritic cell
1
endothelial cell of artery
1
endothelial cell of lymphatic vessel
1
erythrocyte
1
gabaergic neuron
1
glial cell
1
glomerular visceral epithelial cell
1
immature natural killer cell
1
kidney distal convoluted tubule epithelial cell
1
kidney interstitial cell
1
kidney loop of Henle epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal convoluted tubule epithelial cell & kidney proximal straight tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
lymphocyte(CL:0000542) and natural killer cell(CL:0000623)
1
macrophage(CL:0000235) and neutrophil(CL:0000775)
1
megakaryocyte
1
microglial cell/astrocyte
1
myeloid dendritic cell
1
myofibroblast cell
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
natural killer cell mediated cytotoxicity
1
neural cell
1
neuroendocrine cell
1
neuron
1
non-classical monocyte
1
non-neuronal cell
1
oligodendrocyte
1
pancreatic endothelial cell
1
pancreatic immune cell
1
pericyte cell
1
plasma cell
1
preadipocyte
1
proximal tubule cells with injury markers
1
renal intercalated cell
1
renal principal cell
1
skeletal muscle myoblast
1
stellate neuron
1
type I pneumocyte
1
type II pneumocyte
Date released
1
February, 2024
June, 2020
Software used
1
macs
Lab
1
Stephen Parker, UMich
Project
1
AMP
RFA
1
AMP2
assembly!
GRCh38
month_released!
June, 2020
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Download
FileSet
DSR154JTR
released
Annotation file set
: Cell type chromatin broad peaks and bw of glial Schwann from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP