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Schema
Citing CMDGA
Clear Filters
Annotation type
9
chromatin state
5
accessible chromatin
1
eQTL
Annotation Category
5
cis-regulatory elements
Annotation type Category
3
snATAC-seq
2
DNase-seq
Available data
5
bed bed3+
5
bigWig
File set status
5
released
Genome assembly (visualization)
58
hg19
5
GRCh38
Organism
5
Homo sapiens
Biosample type
4
primary cell
1
tissue
Biosample term
2
Muller cell
2
retinal pigment epithelial cell
1
retina
retinal bipolar neuron
Organ
115
epithelium
48
connective tissue
33
pancreas
27
kidney
25
vasculature
21
brain
18
blood vessel
18
heart
18
liver
14
limb
13
musculature of body
11
intestine
9
bone element
8
skeleton
6
adrenal gland
6
artery
6
lung
5
eye
5
skin of body
5
stomach
4
adipose tissue
3
extraembryonic component
3
large intestine
3
mammary gland
3
ureter
2
embryo
2
esophagus
2
lymphatic vessel
2
nerve
2
placenta
2
small intestine
1
bone marrow
1
bronchus
1
gonad
1
ovary
1
spleen
1
thymus
1
thyroid gland
1
uterus
1
vein
Life stage
1
fetal
Date released
3
November, 2021
2
January, 2020
Software used
5
macs
Lab
3
Bing Ren, UCSD
2
AMP-T2D consortium
Project
3
ENCODE
2
AMP
RFA
3
ENCODE3
2
AMP
biosample_term_name!
heart left ventricle
retinal bipolar neuron
Showing 5 of 5 results
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Download
FileSet
DSR577CUE
released
Annotation file set
: Accessible chromatin annotation of Fetal Retinal Progenitors and Muller glia 2 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR891WWK
released
Annotation file set
: Accessible chromatin annotation of Fetal Retinal Progenitors and Muller glia 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR760OPB
released
Annotation file set
: Accessible chromatin annotation of Fetal Retinal Pigment Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR296CDQ
released
Annotation file set
: Accessible chromatin annotation of retinal pigment epithelial cell from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR391RSX
released
Annotation file set
: Accessible chromatin annotation of retina from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP