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Schema
Citing CMDGA
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Annotation type
3
Fine-mapped variants
3
accessible chromatin
2
chromatin state
2
eQTL
Annotation Category
3
cis-regulatory elements
Annotation type Category
2
ATAC-seq
1
snATAC-seq
Available data
3
bed bed3+
3
bigWig
File set status
3
released
Genome assembly (visualization)
8
hg19
3
GRCh38
Organism
3
Homo sapiens
Biosample type
2
tissue
1
primary cell
Biosample term
16
fibroblast
9
pericyte cell
3
cardiac fibroblast
3
osteoblast
2
fibroblast of cardiac tissue
2
hepatic stellate cell
2
mesangial cell
2
omental fat pad
2
pancreatic stellate cell
2
subcutaneous adipose tissue
1
adipocyte
1
brain pericyte
1
luteal cell
1
skin fibroblast
1
stromal cell
Organ
3
connective tissue
2
adipose tissue
Life stage
1
adult
Date released
1
January, 2020
1
November, 2021
1
September, 2018
Software used
3
macs
Lab
2
AMP-T2D consortium
1
Bing Ren, UCSD
Project
2
AMP
1
ENCODE
RFA
2
AMP
1
ENCODE3
organ_slims!
pituitary gland
Showing 3 of 3 results
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Download
FileSet
DSR987PCG
released
Annotation file set
: Accessible chromatin annotation of Adipocyte from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR687BVG
released
Annotation file set
: Accessible chromatin annotation of adipose white tissue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR978YHK
released
Annotation file set
: ATAC-seq sites in subcutaneous adipose tissue for 1 sample from ENCODE
Lab:
AMP-T2D consortium
Project:
AMP