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Schema
Citing CMDGA
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Annotation type
5
accessible chromatin
1
target gene predictions
Annotation Category
5
cis-regulatory elements
Annotation type Category
2
snATAC-seq
1
ATAC-seq
Available data
5
bed bed3+
5
bigWig
File set status
5
released
Genome assembly (visualization)
8
hg19
5
GRCh38
Organism
5
Homo sapiens
Biosample type
3
primary cell
2
tissue
Biosample term
5
islet of Langerhans
5
pancreatic acinar cell
5
pancreatic ductal cell
4
pancreatic beta cell
3
pancreas
3
pancreatic alpha cell
2
pancreatic stellate cell
1
EndoC_BH1
1
fetal thymocyte
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic delta cell
1
type B pancreatic cell
Organ
5
epithelium
5
pancreas
0
thymus
Life stage
1
child
Date released
2
February, 2024
2
November, 2021
1
October, 2019
Software used
5
macs
Lab
2
Bing Ren, UCSD
2
Kyle Gaulton, UCSD
1
AMP-T2D consortium
Project
3
AMP
2
ENCODE
RFA
3
AMP
2
ENCODE3
organ_slims!
urinary bladder
Showing 5 of 5 results
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Download
FileSet
DSR473EZY
released
Annotation file set
: accessible chromatin annotation from scATAC-seq of MUC5B Ductal
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR183WZN
released
Annotation file set
: accessible chromatin annotation from scATAC-seq of Ductal
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR864AEY
released
Annotation file set
: Accessible chromatin annotation of Fetal Pancreatic Ductal Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR237XFF
released
Annotation file set
: Accessible chromatin annotation of Ductal Cell (Pancreatic) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR920WKD
released
Annotation file set
: Pancreatic ductal cell accessible chromatin annotation of overlapping ATAC-seq sites from 3 samples with most significant peak selected
Lab:
AMP-T2D consortium
Project:
AMP