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Schema
Citing CMDGA
Clear Filters
Annotation type
5
candidate regulatory elements
3
accessible chromatin
3
chromatin state
3
gene expression
3
target gene predictions
1
eQTL
Annotation Category
3
cis-regulatory elements
Annotation type Category
2
ATAC-seq
1
snATAC-seq
Available data
3
bed bed3+
3
bigWig
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
1
Homo sapiens
Biosample type
3
primary cell
Biosample term
16
monocyte
6
hepatocyte
6
pancreatic beta cell
5
endothelial cell
5
pancreatic alpha cell
4
endothelial cell of hepatic sinusoid
4
glutamatergic neuron
4
pancreatic delta cell
3
cardiac fibroblast
3
B cell
3
CD8-positive, alpha-beta T cell
3
macrophage
3
memory B cell
3
naive B cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
natural killer cell
3
osteoblast
3
pancreatic acinar cell
3
pancreatic ductal cell
3
regulatory T cell
3
smooth muscle cell
2
T cell
2
T follicular helper cell
2
T-helper 1 cell
2
T-helper 17 cell
2
T-helper 2 cell
2
aortic endothelial cell
2
capillary endothelial cell
2
central memory CD8-positive, alpha-beta T cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
extracellular matrix secreting cell
2
fibroblast
2
gamma-delta T cell
2
leukocyte
2
mature natural killer cell
2
memory T cell
2
memory regulatory T cell
2
mesenchymal stem cell
2
naive regulatory T cell
2
pancreatic polypeptide-secreting cell
2
pancreatic stellate cell
2
plasmacytoid dendritic cell
2
skeletal muscle fiber
2
skeletal muscle satellite cell
2
type I muscle cell
2
type II muscle cell
1
CD4-positive helper T cell
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
adipocyte
1
astrocyte
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
basal cell
1
brain microvascular endothelial cell
1
brain pericyte
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
ciliated cell
1
club cell
1
conventional dendritic cell
1
endothelial cell of artery
1
endothelial cell of lymphatic vessel
1
endothelial cell of umbilical vein
1
epithelial cell of proximal tubule
1
erythrocyte
1
gabaergic neuron
1
glial cell
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
hepatic stellate cell
1
immature natural killer cell
1
kidney capillary endothelial cell
1
kidney distal convoluted tubule epithelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
kidney interstitial cell
1
kidney loop of Henle epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal convoluted tubule epithelial cell & kidney proximal straight tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
kidney tubule cell
1
lymphocyte(CL:0000542) and natural killer cell(CL:0000623)
1
macrophage(CL:0000235) and neutrophil(CL:0000775)
1
megakaryocyte
1
microglial cell/astrocyte
1
myeloid dendritic cell
1
myofibroblast cell
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
natural killer cell mediated cytotoxicity
1
neural cell
1
neuroendocrine cell
1
neuron
1
non-classical monocyte
1
non-neuronal cell
1
oligodendrocyte
1
pancreatic endothelial cell
1
pancreatic immune cell
1
pericyte cell
1
plasma cell
1
preadipocyte
1
proximal tubule cells with injury markers
1
renal cortical epithelial cell
1
renal intercalated cell
1
renal principal cell
1
retinal pigment epithelial cell
1
skeletal muscle cell
1
skeletal muscle myoblast
1
smooth muscle cell of the brain vasculature
1
stellate neuron
1
type I pneumocyte
1
type II pneumocyte
Organ
1
bronchus
1
epithelium
Date released
2
May, 2020
1
April, 2020
Lab
2
AMP-T2D consortium
1
Xin Sun, UCSD
Project
2
AMP
ENCODE
1
LungMap
RFA
2
AMP
1
LungMap2
award.project!
ENCODE
month_released!
June, 2020
Showing 3 of 3 results
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Download
FileSet
DSR848VTY
released
Annotation file set
: ATAC-seq peaks in club cells from lung snATAC-seq
Lab:
Xin Sun, UCSD
Project:
LungMap
FileSet
DSR771TTS
released
Annotation file set
: GSE118189 ATACseq accessible chromatin of normal T-helper 2 cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR947BYY
released
Annotation file set
: GSE118189 ATACseq accessible chromatin of LPS-stimulated T-helper 2 cell
Lab:
AMP-T2D consortium
Project:
AMP