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Schema
Citing CMDGA
Clear Filters
Annotation type
56
target gene predictions
6
binding sites
6
candidate regulatory elements
5
accessible chromatin
4
histone modifications
2
gene expression
1
chromatin state
1
eQTL
Annotation Category
5
cis-regulatory elements
Annotation type Category
3
snATAC-seq
2
DNase-seq
Available data
5
bed bed3+
3
bigWig
File set status
5
released
Genome assembly (visualization)
5
hg19
2
GRCh38
Organism
5
Homo sapiens
Biosample type
4
primary cell
1
tissue
Biosample term
2
megakaryocyte
1
Ishikawa
1
uterine smooth muscle cell
1
uterus
Organ
200
epithelium
85
connective tissue
61
pancreas
59
eye
50
kidney
42
brain
31
vasculature
27
musculature of body
26
heart
24
liver
22
blood vessel
21
intestine
20
limb
15
bone element
13
skin of body
12
blood
12
bodily fluid
12
embryo
12
lung
10
large intestine
9
artery
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
placenta
4
ureter
3
lymphatic vessel
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
bronchus
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Date released
2
June, 2020
2
November, 2021
1
January, 2021
Software used
5
macs
Lab
2
AMP-T2D consortium
2
Bing Ren, UCSD
1
Kyle Gaulton, UCSD
Project
2
AMP
2
ENCODE
1
T1D
RFA
2
AMP
2
ENCODE3
1
T1D
award.project!
LungMap
month_released!
September, 2022
Showing 5 of 5 results
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Download
FileSet
DSR680BYM
released
Annotation file set
: Accessible chromatin annotation of Smooth Muscle (Uterine) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR326TXQ
released
Annotation file set
: Accessible chromatin annotation of Fetal Megakaryocyte from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR373YCF
released
Annotation file set
: Accessible chromatin annotation for Uterus Uterus from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR250RSS
released
Annotation file set
: Accessible chromatin annotation for Uterus Ishikawa from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR213MXZ
released
Annotation file set
: accessible chromatin annotation from snATAC-seq of megakaryocyte
Lab:
Kyle Gaulton, UCSD
Project:
T1D