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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
22
candidate regulatory elements
12
chromatin state
12
target gene predictions
3
Fine-mapped variants
3
accessible chromatin
2
eQTL
2
gene expression
2
variant allelic effects
1
binding sites
1
histone modifications
Annotation Category
3
cis-regulatory elements
Annotation type Category
2
DNase-seq
1
ATAC-seq
Available data
3
bed bed3+
1
bigWig
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
2
tissue
1
in vitro differentiated cells
Biosample term
22
retina
20
pigmented layer of retina
17
monocyte
16
fibroblast
15
endothelial cell
13
excitatory neuron
12
macrophage
10
neural progenitor cell
10
pericyte cell
9
smooth muscle cell
8
B cell
8
EndoC_BH1
8
astrocyte
8
kidney
8
retinal pigment epithelial cell
7
T cell
7
hepatocyte
7
islet of Langerhans
7
pancreatic ductal cell
6
adipocyte
6
embryonic stem cell
6
endothelial cell of hepatic sinusoid
6
glutamatergic neuron
6
pancreatic acinar cell
6
pancreatic beta cell
5
chondrocyte
5
erythroblast
5
inhibitory neuron
5
osteoblast
5
pancreatic alpha cell
5
skeletal muscle fiber
5
skeletal muscle satellite cell
4
CD8-positive, alpha-beta T cell
4
SGBS preadipocytes
4
fibroblast of cardiac tissue
4
liver
4
regulatory T cell
4
type II pneumocyte
3
T-helper 1 cell
3
colon epithelial cell
3
cortical cell of adrenal gland
3
endothelial cell of lymphatic vessel
3
enterocyte
3
gabaergic neuron
3
heart
3
memory B cell
3
mesenchymal stem cell
3
natural killer cell
3
pancreas
3
pancreatic delta cell
3
pancreatic stellate cell
3
skin fibroblast
3
stomach
3
type I muscle cell
3
type I pneumocyte
3
type II muscle cell
2
HepG2
2
Muller cell
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
Rh-4 cell
2
T follicular helper cell
2
T-helper 17 cell
2
T-helper 2 cell
2
acute myeloid leukemia cell
2
adipose-derived stem cell
2
aortic endothelial cell
2
basal cell
2
blood vessel smooth muscle cell
2
bone marrow cell
2
capillary endothelial cell
2
central memory CD8-positive, alpha-beta T cell
2
ciliated cell
2
club cell
2
coronary artery
2
differentiating adipose-derived stem cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
endocardial cell
2
endothelial cell of umbilical vein
2
enteric neuron
2
enteric smooth muscle cell
2
erythroid cell
2
extracellular matrix secreting cell
2
fetal cardiomyocyte
2
gamma-delta T cell
2
glial cell
2
glomerular visceral epithelial cell
2
hepatic stellate cell
2
keratinocyte
2
leukocyte
2
luminal epithelial cell of mammary gland
2
mammary gland epithelial cell
2
mature natural killer cell
medulla oblongata
2
memory T cell
2
memory regulatory T cell
2
mesangial cell
2
mesothelial cell
2
midbrain
2
naive B cell
2
naive regulatory T cell
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
neuron
2
oligodendrocyte
2
oligodendrocyte precursor cell
2
plasma cell
2
right atrium auricular region
2
schwann cell
2
skeletal muscle myoblast
2
smooth muscle cell of the esophagus
2
spinal cord
2
spleen
2
tibial artery
2
tibial nerve
1
786-O cell
1
A-673 cell
1
A172
1
A549
1
ACHN
1
AG04449 cell
1
AG04450 cell
1
AG08396 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
Ammon's horn
1
B-Lymphocytes
1
B-lymphocyte
1
BE(2)-C
1
BJ cell
1
CD1c-positive myeloid dendritic cell
1
CD4-Positive T-Lymphocytes
1
CD4-positive helper T cell
1
CD4-positive, alpha-beta T cell
1
CMK
1
COLO-829 cell
1
COLO205
1
Caco-2 cell
1
Caki2
1
D341 Med cell
1
DG-75 cell
1
Daoy
1
ECC-1
1
G-401 cell
1
GM03348
1
GM04503
1
GM04504
1
GM06990
1
GM10248
1
GM10266
1
GM12864
1
GM12865
1
GM12878
1
GM13976
1
GM13977
1
GM18507
1
GM19240
1
GM20000
1
GM23248
1
GP5d
1
Glioblastoma
1
H1-hESC
1
H4
1
H7-hESC
1
HAC cell
1
HAP-1
1
HBMEC cell
1
HCT-116 cell
1
HEK293
1
HGF
1
HL-60
1
HT-29
1
HUES6
1
HUES8
1
HeLa cell
1
Hodgkin lymphoma cell line
1
HuH-7
1
HuTu-80 cell
1
IMR-90
1
Ishikawa
1
Jurkat
1
K562
1
KARPAS-422 cell
1
KBM-7
1
Kasumi-1
1
L-1236 cell
1
L-428 cell
1
L1-S8
1
L1-S8R
1
LHCN-M2
1
LNCAP
1
LoVo cell
1
M059J
1
MCF-7
1
MCF10A-Er-Src cell
1
MDA-MB-231 cell
1
MG63
1
MM.1S
1
MOLM-13 cell
Organ
2
heart
Date released
2
June, 2020
January, 2020
1
November, 2019
Software used
3
macs
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
award.project!
T1D
biosample_term_name!
medulla oblongata
month_released!
January, 2020
Showing 3 of 3 results
table-tab-icon
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Download
FileSet
DSR260GGW
released
Annotation file set
: Accessible chromatin annotation for Cardiovascular Right atrium auricular region from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR365ACB
released
Annotation file set
: Accessible chromatin annotation for Blood Hematopoietic Stem Cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR521SIB
released
Annotation file set
: Accessible chromatin annotation of right atrium auricular region
Lab:
AMP-T2D consortium
Project:
AMP