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Schema
Citing CMDGA
Clear Filters
Annotation type
2
binding sites
2
candidate regulatory elements
1
accessible chromatin
1
chromatin state
1
histone modifications
1
target gene predictions
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
DNase-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
23
retina
20
pigmented layer of retina
17
monocyte
10
kidney
10
neural progenitor cell
8
retinal pigment epithelial cell
7
hepatocyte
6
embryonic stem cell
6
islet of Langerhans
5
SGBS preadipocytes
5
adipocyte
5
chondrocyte
5
endothelial cell
5
heart
5
osteoblast
5
pancreas
5
pancreatic ductal cell
4
B cell
4
endothelial cell of hepatic sinusoid
4
glutamatergic neuron
4
liver
4
pancreatic beta cell
4
regulatory T cell
3
CD8-positive, alpha-beta T cell
3
T-helper 1 cell
3
coronary artery
3
heart left ventricle
3
mesenchymal stem cell
3
pancreatic acinar cell
3
pancreatic alpha cell
3
pancreatic stellate cell
3
right atrium auricular region
3
smooth muscle cell
3
stomach
3
tibial artery
3
tibial nerve
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
T cell
2
T follicular helper cell
2
T-helper 17 cell
2
T-helper 2 cell
2
acute myeloid leukemia cell
2
adipose tissue
2
adipose-derived stem cell
2
aortic endothelial cell
2
bone marrow cell
2
cardiac muscle cell
2
central memory CD8-positive, alpha-beta T cell
2
differentiating adipose-derived stem cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
endothelial cell of umbilical vein
2
erythroid cell
2
fibroblast
2
gamma-delta T cell
2
glomerular endothelial cell
2
glomerular visceral epithelial cell
2
hepatic stellate cell
2
kidney glomerular epithelial cell
2
kidney tubule cell
2
leukocyte
2
mature natural killer cell
2
memory B cell
2
memory T cell
2
memory regulatory T cell
2
muscle of leg
2
naive B cell
2
naive regulatory T cell
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
natural killer cell
2
occipital lobe
2
omental fat pad
2
pancreatic delta cell
2
renal cortical epithelial cell
2
renal pelvis
2
skeletal muscle fiber
2
skeletal muscle myoblast
2
skeletal muscle satellite cell
2
skin fibroblast
2
spleen
2
subcutaneous adipose tissue
2
superior temporal gyrus
2
type I muscle cell
2
type II muscle cell
1
hindlimb muscle
1
B-Lymphocytes
1
B-lymphocyte
1
CD1c-positive myeloid dendritic cell
1
CD4-Positive T-Lymphocytes
1
CD4-positive helper T cell
1
Ishikawa
1
Peyer's patch
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
Schwann cell
1
Th1 cell
1
Th17 cell
1
Th2 cell
1
adrenal gland
1
aortic adventitial fibroblast
1
ascending aorta
1
astrocyte
1
bipolar neuron
1
breast epithelium
1
bronchial epithelial cell
1
cardiac precursors
1
chorion membrane
1
cortex of kidney
1
crypt of Lieberkuhn
1
dedifferentiated amniotic fluid mesenchymal stem cell
1
dermis microvascular lymphatic vessel endothelial cell
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
embryonic facial prominence
1
epithelial cell of proximal tubule
1
esophagus muscularis mucosa
1
esophagus squamous epithelium
1
excitatory neuron
1
eye
1
fetal heart
1
fibroblast of mammary gland
1
fibroblast of peridontal ligament
1
fibroblast of pulmonary artery
1
fibroblast of villous mesenchyme
1
forelimb muscle
1
foreskin fibroblast
1
foreskin keratinocyte
1
foreskin melanocyte
1
gabaergic neuron
1
gastrocnemius medialis
1
glial cell
1
glomerular epithelium
1
heart right ventricle
1
hematopoietic multipotent progenitor cell
1
iPS DF 4.7 Cell Line
1
immature natural killer cell
1
iris pigment epithelial cell
1
kidney capillary endothelial cell
1
kidney distal convoluted tubule epithelial cell
1
kidney epithelial cell
1
kidney interstitial cell
1
kidney loop of Henle epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal convoluted tubule epithelial cell & kidney proximal straight tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
large intestine
1
left cardiac atrium
1
left renal cortex interstitium
1
left renal pelvis
1
limb
1
lower motor neuron
1
lymphocyte(CL:0000542) and natural killer cell(CL:0000623)
1
macrophage
1
macrophage(CL:0000235) and neutrophil(CL:0000775)
1
mammary epithelial cell
1
mammary gland epithelial cell
1
mesendoderm
1
microglial cell/astrocyte
1
muscle of arm
1
myeloid dendritic cell
1
neoplastic cell
1
neural cell
1
neuron
1
neuron cell of Hypothalamus (neuron)
1
neuronal stem cell
1
non-neuronal cell
1
non-pigmented ciliary epithelial cell
1
olfactory neurosphere cell line
1
oligodendrocyte
1
ovary
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic endothelial cell
1
pancreatic immune cell
1
pancreatic polypeptide-secreting cell
1
peripheral blood stem cell
1
placenta
1
plasma cell
1
plasmacytoid dendritic cell
1
preadipocyte
1
primordial germ cell
1
prostate gland
1
proximal epiphysis
1
proximal epiphysis of femur
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
1
proximal tubule cells with injury markers
1
psoas muscle
1
pulmonary artery endothelial cell
1
pulmonary interstitial fibroblast
1
renal cell carcinoma
1
renal cortex interstitium
1
renal cortex tubule
1
renal epithelial cell
1
renal intercalated cell
1
renal principal cell
1
right kidney
Organ
1
connective tissue
1
extraembryonic component
1
placenta
Date released
1
June, 2020
Software used
1
macs
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
biosample_type!
cell line
organ_slims!
brain
Showing 1 of 1 results
table-tab-icon
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Download
FileSet
DSR263KFM
released
Annotation file set
: Accessible chromatin annotation for Placenta HVMF from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP