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Schema
Citing CMDGA
Clear Filters
Annotation type
7
accessible chromatin
5
gene expression
Annotation Category
7
cis-regulatory elements
Annotation type Category
5
ATAC-seq
2
snATAC-seq
Available data
7
bed bed3+
7
bigWig
File set status
7
released
Genome assembly (visualization)
7
hg19
5
GRCh38
Organism
7
Homo sapiens
Biosample type
7
primary cell
Biosample term
7
kidney
5
hepatocyte
2
capillary endothelial cell
2
endothelial cell
2
extracellular matrix secreting cell
2
macrophage
2
natural killer cell
2
pancreatic alpha cell
2
pancreatic beta cell
2
pancreatic delta cell
1
B cell
1
CD8-positive, alpha-beta T cell
1
T cell
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
basal cell
1
ciliated cell
1
club cell
1
conventional dendritic cell
1
endothelial cell of artery
1
endothelial cell of lymphatic vessel
1
erythrocyte
1
glomerular visceral epithelial cell
1
kidney distal convoluted tubule epithelial cell
1
kidney interstitial cell
1
kidney loop of Henle epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal convoluted tubule epithelial cell & kidney proximal straight tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
lymphocyte(CL:0000542) and natural killer cell(CL:0000623)
1
macrophage(CL:0000235) and neutrophil(CL:0000775)
1
megakaryocyte
1
memory B cell
1
monocyte
1
myofibroblast cell
1
naive B cell
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
naive thymus-derived CD8-positive, alpha-beta T cell
1
natural killer cell mediated cytotoxicity
1
neuroendocrine cell
1
non-classical monocyte
1
pancreatic acinar cell
1
pancreatic ductal cell
1
pancreatic polypeptide-secreting cell
1
pancreatic stellate cell
1
pericyte cell
1
plasmacytoid dendritic cell
1
proximal tubule cells with injury markers
1
regulatory T cell
1
renal intercalated cell
1
renal principal cell
1
stellate neuron
1
type I pneumocyte
1
type II pneumocyte
Organ
7
epithelium
5
liver
2
pancreas
Life stage
5
adult
Date released
5
February, 2024
2
January, 2021
November, 2021
Software used
7
macs
Lab
5
Ines Cebola, Imperial College London
2
Kyle Gaulton, UCSD
Project
5
AMP
2
T1D
RFA
5
AMP2
AMP
2
T1D
award.rfa!
AMP
month_released!
November, 2021
Showing 7 of 7 results
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FileSet
DSR614AYG
released
Annotation file set
: Accessible chromatin of primary hepatocytes in basal media with 10nM insulin, 320µM palmitic acid and 320µM oleic acid (18 hours). Monolayer culture, day 3.
Lab:
Ines Cebola, Imperial College London
Project:
AMP
FileSet
DSR961YSK
released
Annotation file set
: Accessible chromatin of primary hepatocytes in basal media with 10nM insulin and 320µM oleic acid (18 hours). Monolayer culture, day 3.
Lab:
Ines Cebola, Imperial College London
Project:
AMP
FileSet
DSR909IMA
released
Annotation file set
: Accessible chromatin of primary hepatocytes in basal media with 10nM insulin and 320µM palmitic acid (18 hours). Monolayer culture, day 3.
Lab:
Ines Cebola, Imperial College London
Project:
AMP
FileSet
DSR862SUJ
released
Annotation file set
: Accessible chromatin of primary hepatocytes in basal media with 10nM insulin (18 hours). Monolayer culture, day 3.
Lab:
Ines Cebola, Imperial College London
Project:
AMP
FileSet
DSR683ANQ
released
Annotation file set
: Accessible chromatin of primary hepatocytes in basal media with 0.1nM insulin (18 hours). Monolayer culture, day 3.
Lab:
Ines Cebola, Imperial College London
Project:
AMP
FileSet
DSR821QOK
released
Annotation file set
: accessible chromatin annotation from snATAC-seq of SSTlow_delta
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR247PPG
released
Annotation file set
: accessible chromatin annotation from snATAC-seq of SSThigh_delta
Lab:
Kyle Gaulton, UCSD
Project:
T1D