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Schema
Citing CMDGA
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Annotation type
3
target gene predictions
1
accessible chromatin
1
gene expression
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
snATAC-seq
Available data
1
bed bed3+
1
bigWig
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
7
kidney
5
endothelial cell
5
hepatocyte
4
endothelial cell of hepatic sinusoid
4
pancreatic ductal cell
4
pancreatic stellate cell
3
macrophage
3
pancreatic acinar cell
3
pancreatic alpha cell
3
pancreatic beta cell
3
pancreatic delta cell
2
T cell
2
capillary endothelial cell
2
extracellular matrix secreting cell
2
fibroblast
2
natural killer cell
2
pancreatic polypeptide-secreting cell
2
skeletal muscle fiber
2
smooth muscle cell
1
B cell
1
CD4-positive helper T cell
1
CD8-positive, alpha-beta T cell
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
Schwann cell
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
adipocyte
1
basal cell
1
ciliated cell
1
club cell
1
conventional dendritic cell
1
embryonic stem cell
1
endothelial cell of artery
1
endothelial cell of lymphatic vessel
1
erythrocyte
1
glial cell
1
glomerular visceral epithelial cell
1
kidney distal convoluted tubule epithelial cell
1
kidney interstitial cell
1
kidney loop of Henle epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal convoluted tubule epithelial cell & kidney proximal straight tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
leukocyte
1
liver
1
lymphocyte(CL:0000542) and natural killer cell(CL:0000623)
1
macrophage(CL:0000235) and neutrophil(CL:0000775)
1
megakaryocyte
1
memory B cell
1
mesenchymal stem cell
1
monocyte
1
myofibroblast cell
1
naive B cell
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
naive thymus-derived CD8-positive, alpha-beta T cell
1
natural killer cell mediated cytotoxicity
1
neural cell
1
neuroendocrine cell
1
neuron cell of Hypothalamus (neuron)
1
non-classical monocyte
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic endothelial cell
1
pancreatic immune cell
1
pericyte cell
1
plasmacytoid dendritic cell
1
proximal tubule cells with injury markers
1
regulatory T cell
1
renal intercalated cell
1
renal principal cell
1
skeletal muscle satellite cell
1
stellate neuron
1
tissue-resident macrophage
1
type B pancreatic cell
1
type I muscle cell
1
type I pneumocyte
1
type II muscle cell
1
type II pneumocyte
Date released
1
January, 2021
Software used
1
macs
Lab
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Project
1
T1D
RFA
ENCODE3
1
T1D
award.rfa!
ENCODE3
lab.title!
AMP-T2D consortium
Showing 1 of 1 results
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Download
FileSet
DSR805RPA
released
Annotation file set
: accessible chromatin annotation from snATAC-seq of pancreatic_CD8_T
Lab:
Kyle Gaulton, UCSD
Project:
T1D