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Schema
Citing CMDGA
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Annotation type
3
accessible chromatin
3
differential activity
2
target gene predictions
1
chromatin state
1
gene expression
1
variant allelic effects
Annotation Category
3
cis-regulatory elements
Annotation type Category
1
snATAC-seq
Available data
3
bigWig
2
bed bed3+
1
bigBed narrowPeak
File set status
3
released
Genome assembly (visualization)
3
hg19
2
GRCh38
Organism
3
Homo sapiens
Biosample type
2
tissue
1
primary cell
Biosample term
3
pancreatic ductal cell
3
pancreatic stellate cell
2
pancreatic acinar cell
1
Schwann cell
1
endothelial cell
1
liver
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
pancreatic delta cell
1
pancreatic endothelial cell
1
pancreatic immune cell
1
pancreatic polypeptide-secreting cell
1
tissue-resident macrophage
1
type B pancreatic cell
Organ
3
epithelium
3
pancreas
Life stage
1
adult
Date released
3
February, 2024
Software used
3
macs
Lab
AMP-T2D consortium
3
Kyle Gaulton, UCSD
Project
3
AMP
RFA
3
AMP
2
ENCODE3
1
T1D
lab.title!
AMP-T2D consortium
Showing 3 of 3 results
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Download
FileSet
DSR473EZY
released
Annotation file set
: accessible chromatin annotation from scATAC-seq of MUC5B Ductal
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR183WZN
released
Annotation file set
: accessible chromatin annotation from scATAC-seq of Ductal
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR553FGJ
released
Annotation file set
: pancreatic ductal cell accessible chromatin annotation from snATAC
Lab:
Kyle Gaulton, UCSD
Project:
AMP