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Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
snATAC-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
7
kidney
5
hepatocyte
4
endothelial cell of hepatic sinusoid
3
endothelial cell
2
fibroblast
2
skeletal muscle fiber
2
smooth muscle cell
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
T cell
1
adipocyte
1
embryonic stem cell
1
glial cell
1
glomerular visceral epithelial cell
1
kidney distal convoluted tubule epithelial cell
1
kidney interstitial cell
1
kidney loop of Henle epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal convoluted tubule epithelial cell & kidney proximal straight tubule epithelial cell
kidney proximal straight tubule epithelial cell
1
leukocyte
1
lymphocyte(CL:0000542) and natural killer cell(CL:0000623)
1
macrophage
1
macrophage(CL:0000235) and neutrophil(CL:0000775)
1
mesenchymal stem cell
1
neural cell
1
neuron cell of Hypothalamus (neuron)
1
proximal tubule cells with injury markers
1
renal intercalated cell
1
renal principal cell
1
skeletal muscle satellite cell
1
type I muscle cell
1
type II muscle cell
Organ
2
connective tissue
Life stage
2
adult
Date released
2
May, 2022
Software used
2
macs
Lab
2
Bing Ren, UCSD
Project
2
AMP
RFA
ENCODE3
2
AMP2
award.rfa!
ENCODE3
biosample_term_name!
kidney proximal straight tubule epithelial cell
Showing 2 of 2 results
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Download
FileSet
DSR548JZG
released
Annotation file set
: Accessible chromatin annotation of Fibroblast(sub-type 2) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP
FileSet
DSR988BGT
released
Annotation file set
: Accessible chromatin annotation of Fibroblast(sub-type 1) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP