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Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
Annotation Category
2
cis-regulatory elements
Annotation type Category
1
ATAC-seq
1
snATAC-seq
Available data
2
bed bed3+
1
bigWig
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
7
kidney
5
hepatocyte
4
endothelial cell of hepatic sinusoid
2
endothelial cell
2
fibroblast
1
T cell
1
glomerular visceral epithelial cell
1
kidney distal convoluted tubule epithelial cell
1
kidney interstitial cell
1
kidney loop of Henle epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal convoluted tubule epithelial cell & kidney proximal straight tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
lymphocyte(CL:0000542) and natural killer cell(CL:0000623)
1
macrophage
1
macrophage(CL:0000235) and neutrophil(CL:0000775)
1
proximal tubule cells with injury markers
1
renal intercalated cell
1
renal principal cell
1
smooth muscle cell
Organ
2
epithelium
Life stage
2
adult
Date released
1
August, 2021
1
May, 2022
Software used
2
macs
Lab
1
Bing Ren, UCSD
1
Katalin Susztak, Upenn
Stephen Parker, UMich
Project
2
AMP
RFA
10
ENCODE3
2
AMP
2
AMP2
1
T1D
biosample_term_name!
BE(2)-C
lab.title!
Stephen Parker, UMich
Showing 2 of 2 results
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Download
FileSet
DSR426RPD
released
Annotation file set
: Accessible chromatin annotation of Endothelial cells from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP
FileSet
DSR493PXL
released
Annotation file set
: Accessible chromatin from Katalin Susztak 75kidney Project of Endothelial cells
Lab:
Katalin Susztak, Upenn
Project:
AMP