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Citing CMDGA
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Annotation type
3
accessible chromatin
3
target gene predictions
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
snATAC-seq
Available data
3
bed bed3+
3
bigWig
File set status
3
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
1
placental hematopoietic stem cell
1
placental villus capillary endothelial cell
1
trophoblast giant cell
Organ
129
epithelium
43
connective tissue
37
pancreas
18
kidney
14
liver
13
musculature of body
12
vasculature
11
intestine
9
blood vessel
9
lung
6
adrenal gland
6
heart
5
skin of body
5
stomach
4
eye
3
extraembryonic component
3
large intestine
3
lymphatic vessel
3
mammary gland
2
bone element
2
bone marrow
2
bronchus
2
embryo
2
esophagus
2
placenta
2
small intestine
1
gonad
1
ovary
1
thymus
1
thyroid gland
1
uterus
Date released
3
November, 2021
Software used
3
macs
Lab
AMP-T2D consortium
3
Bing Ren, UCSD
Project
3
ENCODE
RFA
3
ENCODE3
biosample_term_name!
DG-75 cell
lab.title!
AMP-T2D consortium
organ_slims!
mouth
Showing 3 of 3 results
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Download
FileSet
DSR806IKQ
released
Annotation file set
: Accessible chromatin annotation of Fetal Syncitiotrophoblast,Cytotrophoblast,Trophoblast Giant from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR983RIG
released
Annotation file set
: Accessible chromatin annotation of Fetal Hematopoeitic Stem Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR100TUS
released
Annotation file set
: Accessible chromatin annotation of Fetal Placental Endothelial Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE