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Schema
Citing CMDGA
Clear Filters
Annotation type
5
target gene predictions
4
accessible chromatin
1
caQTL
1
eQTL
1
gene expression
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
ATAC-seq
Available data
1
bed bed3+
File set status
4
released
Genome assembly (visualization)
1
hg19
Organism
4
Homo sapiens
Biosample type
3
in vitro differentiated cells
1
tissue
Biosample term
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
liver
1
neuron cell of Hypothalamus (neuron)
Organ
1
liver
Date released
3
November, 2022
1
May, 2022
Software used
4
macs
Lab
408
AMP-T2D consortium
226
Bing Ren, UCSD
49
Kyle Gaulton, UCSD
20
Katalin Susztak, Upenn
19
Xin Sun, UCSD
12
Stephen Parker, UMich
9
Ines Cebola, Imperial College London
3
Struan F.A. Grant, CHOP
1
Karen Mohlke, UNC
1
Stephen S. Rich Lab @UVA
Project
4
AMP
RFA
3
AMP2
1
AMP
biosample_term_name!
blood vessel smooth muscle cell
biosample_type!
cell line
Showing 4 of 4 results
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FileSet
DSR593BUS
released
Annotation file set
: Accessible chromatin of an established embryonic stem cell derived hypothalamic-like neuron model across three stages of in vitro differentiation (Hypothalamic Neuron).
Lab:
Struan F.A. Grant, CHOP
Project:
AMP
FileSet
DSR817DDX
released
Annotation file set
: Accessible chromatin of an established embryonic stem cell derived hypothalamic-like neuron model across three stages of in vitro differentiation (Hypothalamic Progenitor).
Lab:
Struan F.A. Grant, CHOP
Project:
AMP
FileSet
DSR455VRI
released
Annotation file set
: Accessible chromatin of an established embryonic stem cell derived hypothalamic-like neuron model across three stages of in vitro differentiation (Embryonic Stem Cell).
Lab:
Struan F.A. Grant, CHOP
Project:
AMP
FileSet
DSR303OZW
released
Annotation file set
: Accessible chromatin annotation(consensus peaks) of liver tissue from pilot study(AJHG2021) in Mohlke Lab
Lab:
Karen Mohlke, UNC
Project:
AMP