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Citing CMDGA
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Annotation type
8
candidate regulatory elements
6
target gene predictions
4
chromatin state
2
accessible chromatin
1
eQTL
1
gene expression
1
variant allelic effects
Annotation Category
2
cis-regulatory elements
Annotation type Category
1
DNase-seq
1
snATAC-seq
Available data
2
bed bed3+
1
bigWig
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
1
primary cell
1
tissue
Biosample term
1
thyroid follicular cell
1
thyroid gland
Organ
196
epithelium
82
connective tissue
57
eye
57
pancreas
44
kidney
34
vasculature
33
brain
25
blood vessel
25
musculature of body
23
heart
21
liver
19
limb
17
intestine
11
skin of body
10
artery
10
bone element
9
extraembryonic component
8
lung
8
skeleton
8
stomach
7
adrenal gland
6
adipose tissue
6
embryo
6
large intestine
6
mammary gland
4
esophagus
4
gonad
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
ovary
2
spleen
2
thymus
2
thyroid gland
2
vein
1
blood
1
bodily fluid
1
breast
1
lymphoid tissue
1
mouth
1
nose
1
prostate gland
1
spinal cord
1
testis
1
tongue
1
trachea
1
urinary bladder
Date released
1
June, 2020
1
November, 2021
Software used
2
macs
Lab
1
AMP-T2D consortium
1
Bing Ren, UCSD
Project
1
AMP
1
ENCODE
RFA
1
AMP
1
ENCODE3
biosample_term_name!
epithelial cell of proximal tubule
type I pneumocyte
biosample_type!
cell line
Showing 2 of 2 results
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Download
FileSet
DSR356XOM
released
Annotation file set
: Accessible chromatin annotation of Thyroid Follicular Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR292QNC
released
Annotation file set
: Accessible chromatin annotation for Others Thyroid Gland from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP