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Citing CMDGA
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Annotation type
5
accessible chromatin
Annotation Category
5
cis-regulatory elements
Annotation type Category
5
snATAC-seq
Available data
13
bed bed3+
5
bigWig
File set status
5
released
Genome assembly (visualization)
5
GRCh38
5
hg19
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
2
keratinocyte
1
basal cell of epidermis
1
granular cell of epidermis
1
skin fibroblast
Organ
145
epithelium
55
connective tissue
49
pancreas
35
kidney
25
vasculature
23
eye
21
brain
21
heart
17
blood vessel
16
musculature of body
14
limb
14
liver
11
intestine
10
bone element
9
lung
8
artery
8
skeleton
6
adrenal gland
5
adipose tissue
5
skin of body
5
stomach
3
extraembryonic component
3
large intestine
3
lymphatic vessel
3
mammary gland
3
ureter
2
bone marrow
2
bronchus
2
embryo
2
esophagus
2
nerve
2
placenta
2
small intestine
1
gonad
1
ovary
1
spleen
1
thymus
1
thyroid gland
1
uterus
Date released
5
November, 2021
Software used
5
macs
Lab
5
Bing Ren, UCSD
Project
5
ENCODE
RFA
5
ENCODE3
biosample_term_name!
pigmented layer of retina
relevant_life_stage!
newborn
Showing 5 of 5 results
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Download
FileSet
DSR876HDK
released
Annotation file set
: Accessible chromatin annotation of Granular Epidermal (Skin) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR894JTL
released
Annotation file set
: Accessible chromatin annotation of Basal Epidermal (Skin) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR919NQU
released
Annotation file set
: Accessible chromatin annotation of Keratinocyte 2 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR774OBV
released
Annotation file set
: Accessible chromatin annotation of Keratinocyte 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR579NBW
released
Annotation file set
: Accessible chromatin annotation of Fibroblast (Epithelial) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE