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Schema
Citing CMDGA
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Annotation type
7
candidate regulatory elements
5
accessible chromatin
5
gene expression
3
chromatin state
3
target gene predictions
2
binding sites
1
histone modifications
1
variant allelic effects
Annotation Category
5
cis-regulatory elements
Annotation type Category
4
DNase-seq
1
ATAC-seq
Available data
5
bed bed3+
2
bigWig
File set status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
3
cell line
2
primary cell
Biosample term
10
kidney
3
glomerular visceral epithelial cell
2
glomerular endothelial cell
2
kidney glomerular epithelial cell
2
kidney tubule cell
2
renal cortical epithelial cell
2
renal pelvis
1
ACHN
1
Caki2
1
HEK293
1
RCC 7860
1
cortex of kidney
1
epithelial cell of proximal tubule
1
glomerular epithelium
1
kidney capillary endothelial cell
1
kidney distal convoluted tubule epithelial cell
1
kidney epithelial cell
1
kidney interstitial cell
1
kidney loop of Henle epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
left renal cortex interstitium
1
left renal pelvis
1
metanephros
1
parietal epithelial cell
1
renal cell carcinoma
1
renal cortex interstitium
1
renal cortex tubule
1
renal intercalated cell
1
renal principal cell
1
right kidney
1
right renal cortex interstitium
1
right renal pelvis
1
ureteric bud
Organ
5
kidney
3
epithelium
Life stage
1
adult
1
child
Date released
3
June, 2020
1
August, 2021
1
January, 2020
Software used
5
macs
Lab
4
AMP-T2D consortium
1
Katalin Susztak, Upenn
Project
5
AMP
RFA
4
AMP
1
AMP2
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Showing 5 of 5 results
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Download
FileSet
DSR884VIR
released
Annotation file set
: Accessible chromatin from Katalin Susztak 75kidney Project of Podocytes
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR012KGK
released
Annotation file set
: Accessible chromatin annotation for Kidney Glomerular visceral epithelial cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR192STS
released
Annotation file set
: Accessible chromatin annotation for Kidney ACHN from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR837LJK
released
Annotation file set
: Accessible chromatin annotation for Kidney 293 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR855KHX
released
Annotation file set
: Accessible chromatin annotation of kidney podocytes (glomerular visceral epithelial cell) from GSE115961 DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP