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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
6
chromatin state
5
accessible chromatin
5
binding sites
3
histone modifications
2
target gene predictions
1
candidate regulatory elements
1
gene expression
Annotation Category
5
cis-regulatory elements
Annotation type Category
5
ATAC-seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
5
in vitro differentiated cells
Biosample term
22
retina
20
pigmented layer of retina
15
monocyte
10
neural progenitor cell
8
EndoC_BH1
7
retinal pigment epithelial cell
5
SGBS preadipocytes
5
chondrocyte
5
embryonic stem cell
5
islet of Langerhans
4
glutamatergic neuron
3
cardiac fibroblast
3
adipocyte
3
coronary artery
3
heart
3
heart left ventricle
osteoblast
3
pancreas
3
pancreatic beta cell
2
B cell
2
CD8-positive, alpha-beta T cell
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
T follicular helper cell
2
T-helper 1 cell
2
T-helper 17 cell
2
T-helper 2 cell
2
adipose tissue
2
adipose-derived stem cell
2
aortic endothelial cell
2
cardiac muscle cell
2
central memory CD8-positive, alpha-beta T cell
2
differentiating adipose-derived stem cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
gamma-delta T cell
2
kidney
2
liver
2
mature natural killer cell
2
memory B cell
2
memory T cell
2
memory regulatory T cell
2
naive B cell
2
naive regulatory T cell
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
omental fat pad
2
pancreatic alpha cell
2
regulatory T cell
2
right atrium auricular region
2
subcutaneous adipose tissue
2
tibial artery
2
tibial nerve
1
hindlimb muscle
1
Ammon's horn
1
HepG2
1
ascending aorta
1
astrocyte
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain
1
brain microvascular endothelial cell
1
brain pericyte
1
cardiac precursors
1
caudate nucleus
1
cerebellar cortex
1
cerebellum
1
choroid plexus epithelial cell
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
endothelial cell
1
endothelial cell of umbilical vein
1
epithelial cell of proximal tubule
1
excitatory neuron
1
fetal heart
1
forelimb muscle
1
frontal cortex
1
gabaergic neuron
1
globus pallidus
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
heart right ventricle
1
hepatic stellate cell
1
hepatocyte
1
hippocampal neuron
1
immature natural killer cell
1
kidney capillary endothelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
kidney tubule cell
1
left cardiac atrium
1
left renal cortex interstitium
1
left renal pelvis
1
leukocyte
1
lower motor neuron
1
medulla oblongata
1
mesenchymal stem cell
1
microglial cell/astrocyte
1
midbrain
1
middle frontal gyrus
1
muscle of arm
1
muscle of leg
1
myeloid dendritic cell
1
natural killer cell
1
neuron
1
non-neuronal cell
1
occipital lobe
1
oligodendrocyte
1
pancreatic acinar cell
1
pancreatic delta cell
1
pancreatic ductal cell
1
plasma cell
1
plasmacytoid dendritic cell
1
pons
1
preadipocyte
1
proximal epiphysis
1
proximal epiphysis of femur
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
1
putamen
1
renal cortex interstitium
1
renal cortical epithelial cell
1
renal pelvis
1
right kidney
1
right renal cortex interstitium
1
right renal pelvis
1
skeletal muscle cell
1
skeletal muscle myoblast
1
skeletal muscle satellite cell
1
smooth muscle cell
1
smooth muscle cell of the brain vasculature
1
smooth muscle cell of the coronary artery
1
spleen
1
superior temporal gyrus
1
thoracic aorta
1
type I muscle cell
1
type II muscle cell
0
AG04450 cell
Date released
5
May, 2021
June, 2020
Software used
5
macs
Lab
5
AMP-T2D consortium
1
Struan F.A. Grant, CHOP
Project
5
AMP
RFA
5
AMP
biosample_term_name!
osteoblast
month_released!
June, 2020
Showing 5 of 5 results
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Download
FileSet
DSR995THT
released
Annotation file set
: Accessible chromatin of differentiated hESCs from GSE149148 at developmental stage Late pancreatic progenitor cells
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR305VKL
released
Annotation file set
: Accessible chromatin of differentiated hESCs from GSE149148 at developmental stage Early pancreatic progenitor cells
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR323EMN
released
Annotation file set
: Accessible chromatin of differentiated hESCs from GSE149148 at developmental stage Gut tube cells
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR838FNO
released
Annotation file set
: Accessible chromatin of differentiated hESCs from GSE149148 at developmental stage Embyonic stem cells
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR661PJZ
released
Annotation file set
: Accessible chromatin of differentiated hESCs from GSE149148 at developmental stage Definitive endoderm cells
Lab:
AMP-T2D consortium
Project:
AMP