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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
3
accessible chromatin
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
snATAC-seq
Available data
3
bed bed3+
3
bigWig
File set status
3
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
16
fibroblast
12
excitatory neuron
11
endothelial cell
10
macrophage
9
pericyte cell
7
astrocyte
7
smooth muscle cell
5
T cell
5
erythroblast
5
inhibitory neuron
3
B cell
3
colon epithelial cell
3
cortical cell of adrenal gland
3
enterocyte
3
pancreatic acinar cell
3
skeletal muscle fiber
3
skeletal muscle satellite cell
3
type II pneumocyte
2
Muller cell
2
blood vessel smooth muscle cell
2
endocardial cell
2
endothelial cell of hepatic sinusoid
2
endothelial cell of lymphatic vessel
2
enteric neuron
2
enteric smooth muscle cell
2
fetal cardiomyocyte
2
fibroblast of cardiac tissue
gabaergic neuron
2
glutamatergic neuron
2
keratinocyte
2
luminal epithelial cell of mammary gland
2
mesangial cell
2
mesothelial cell
2
oligodendrocyte precursor cell
2
pancreatic alpha cell
2
pancreatic beta cell
2
pancreatic ductal cell
2
schwann cell
2
smooth muscle cell of the esophagus
2
type I pneumocyte
1
CD4-positive, alpha-beta T cell
1
CD8-positive, alpha-beta T cell
1
adipocyte
1
alveolar macrophage
1
basal cell
1
basal cell of epidermis
1
cardiac endothelial cell
1
cholangiocyte
1
chromaffin cell of adrenal gland
1
ciliated cell
1
ciliated epithelial cell
1
club cell
1
colon goblet cell
1
eccrine cell
1
enterochromaffin-like cell
1
enterocyte of epithelium of small intestine
1
enteroendocrine cell
1
extravillous trophoblast
1
fetal thymocyte
1
foveolar cell of stomach
1
gastric goblet cell
1
glial cell
1
goblet cell
1
granular cell of epidermis
1
hepatic stellate cell
1
hepatoblast
1
hepatocyte
1
intestinal tuft cell
1
islet of Langerhans
1
lung neuroendocrine cell
1
luteal cell
1
mammary gland epithelial cell
1
mast cell
1
mature NK T cell
1
megakaryocyte
1
melanocyte
1
memory B cell
1
metanephros
1
microglial cell
1
myoepithelial cell
1
naive t cell
1
neuron
1
non keratinizing barrier epithelial cell
1
oligodendrocyte
1
pancreatic delta cell
1
paneth cell
1
parietal cell
1
parietal epithelial cell
1
peptic cell
1
peripheral neuron
1
photoreceptor cell
1
placental hematopoietic stem cell
1
placental villus capillary endothelial cell
1
plasma cell
1
regular atrial cardiac myocyte
1
respiratory goblet cell
1
retinal bipolar neuron
1
retinal pigment epithelial cell
1
skeletal muscle fibroblast
1
skin fibroblast
1
small intestine goblet cell
1
stomach neuroendocrine cell
1
stromal cell
1
sympathetic neuron
1
thyroid follicular cell
1
trophoblast giant cell
1
type I cell of adrenal cortex
1
type I muscle cell
1
type II cell of adrenal cortex
1
type II muscle cell
1
ureteric bud
1
uterine smooth muscle cell
1
ventricular cardiac muscle cell
Date released
3
November, 2021
Software used
3
macs
Lab
4
AMP-T2D consortium
3
Bing Ren, UCSD
1
Xin Sun, UCSD
Project
3
ENCODE
RFA
3
ENCODE3
biosample_term_name!
GM13977
gabaergic neuron
Showing 3 of 3 results
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Download
FileSet
DSR995HIR
released
Annotation file set
: Accessible chromatin annotation of Fetal B Lymphocyte 3 (NPY+) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR143LGZ
released
Annotation file set
: Accessible chromatin annotation of Fetal B Lymphocyte 2 (CXCR5+) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR114OHW
released
Annotation file set
: Accessible chromatin annotation of Fetal B Lymphocyte 1 (SPIB+) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE