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Schema
Citing CMDGA
Clear Filters
Annotation type
3
accessible chromatin
1
target gene predictions
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
snATAC-seq
Available data
3
bed bed3+
3
bigWig
File set status
3
released
Genome assembly (visualization)
3
hg19
2
GRCh38
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
4
type II pneumocyte
3
type I pneumocyte
1
A549
1
IMR-90
1
NCI-H226 cell
1
PC-9
1
endothelial cell of artery
1
lung neuroendocrine cell
1
right lung
1
upper lobe of left lung
0
B cell
Organ
3
epithelium
3
lung
Date released
2
November, 2021
1
April, 2020
Software used
2
macs
Lab
2
Bing Ren, UCSD
1
Xin Sun, UCSD
Project
2
ENCODE
1
LungMap
RFA
2
ENCODE3
1
LungMap2
biosample_term_name!
ciliated cell
Showing 3 of 3 results
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Download
FileSet
DSR664CZE
released
Annotation file set
: ATAC-seq peaks in AT1 cells from lung snATAC-seq
Lab:
Xin Sun, UCSD
Project:
LungMap
FileSet
DSR767ZHU
released
Annotation file set
: Accessible chromatin annotation of Fetal Broncial and Alveolar Epithelial Cell 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR436AKV
released
Annotation file set
: Accessible chromatin annotation of Alveolar Type 1 (AT1) Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE