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Schema
Citing CMDGA
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Annotation type
8
gene expression
3
differential activity
2
accessible chromatin
1
target gene predictions
1
variant allelic effects
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ATAC-seq
Available data
2
bed bed3+
1
bigWig
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
2
cell line
Biosample term
8
pancreatic beta cell
8
pancreatic ductal cell
7
islet of Langerhans
7
pancreatic acinar cell
7
pancreatic alpha cell
5
pancreas
5
pancreatic delta cell
4
pancreatic stellate cell
2
EndoC_BH1
2
pancreatic polypeptide-secreting cell
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
type B pancreatic cell
Organ
2
epithelium
2
pancreas
Date released
1
May, 2021
1
November, 2019
Software used
8
macs
deseq2
6
samtools
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
organ_slims!
bone element
software_used.software.name!
deseq2
Showing 2 of 2 results
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Download
FileSet
DSR072AWY
released
Annotation file set
: Accessible chromatin of ATAC-seq of EndoC-βH1 cytokine-treated for GSE123404
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR986YKL
released
Annotation file set
: Accessible chromatin annotation of EndoC_BH1
Lab:
AMP-T2D consortium
Project:
AMP