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Citing CMDGA
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Annotation type
8
target gene predictions
2
binding sites
2
candidate regulatory elements
2
chromatin state
1
accessible chromatin
1
histone modifications
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
DNase-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
cell line
Biosample term
16
fibroblast
10
pericyte cell
6
adipocyte
5
chondrocyte
5
osteoblast
4
fibroblast of cardiac tissue
4
pancreatic stellate cell
3
cardiac fibroblast
3
hepatic stellate cell
3
mesenchymal stem cell
3
skin fibroblast
2
adipose tissue
2
brain pericyte
2
extracellular matrix secreting cell
2
luminal epithelial cell of mammary gland
2
mammary gland epithelial cell
2
mesangial cell
2
omental fat pad
2
subcutaneous adipose tissue
1
CMK
1
GM06990
1
GM12878
1
GM19240
1
GM23248
1
HAP-1
1
HL-60
1
K562
1
KBM-7
1
MCF-7
1
NAMALWA cell
1
OCI-LY7
1
RPMI8226
1
SGBS preadipocytes
1
adipose-derived mesenchymal stem cell
1
dedifferentiated amniotic fluid mesenchymal stem cell
1
fibroblast of mammary gland
1
fibroblast of peridontal ligament
1
fibroblast of pulmonary artery
1
fibroblast of the conjunctiva
1
fibroblast of villous mesenchyme
1
foreskin fibroblast
1
luteal cell
1
mammary epithelial cell
1
peripheral blood stem cell
1
preadipocyte
1
pulmonary interstitial fibroblast
1
stromal cell
Organ
1
blood
1
bodily fluid
0
connective tissue
0
mammary gland
Date released
1
June, 2020
Software used
1
macs
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
organ_slims!
spleen
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Download
FileSet
DSR789FEO
released
Annotation file set
: Accessible chromatin annotation for Blood GM12878 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP