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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
19
candidate regulatory elements
14
target gene predictions
10
chromatin state
2
accessible chromatin
2
binding sites
1
gene expression
1
histone modifications
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
DNase-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
1
cell line
1
in vitro differentiated cells
Biosample term
22
retina
20
pigmented layer of retina
18
monocyte
14
endothelial cell
14
fibroblast
13
excitatory neuron
12
macrophage
10
neural progenitor cell
10
pericyte cell
8
B cell
8
EndoC_BH1
8
astrocyte
8
kidney
8
pancreatic beta cell
8
pancreatic ductal cell
8
retinal pigment epithelial cell
7
hepatocyte
7
islet of Langerhans
7
pancreatic acinar cell
7
pancreatic alpha cell
7
smooth muscle cell
6
T cell
6
adipocyte
6
embryonic stem cell
6
endothelial cell of hepatic sinusoid
6
glutamatergic neuron
5
CD8-positive, alpha-beta T cell
5
chondrocyte
5
erythroblast
5
inhibitory neuron
5
osteoblast
5
pancreatic delta cell
5
regulatory T cell
5
skeletal muscle fiber
4
SGBS preadipocytes
4
fibroblast of cardiac tissue
4
memory B cell
4
natural killer cell
4
pancreatic stellate cell
4
skeletal muscle satellite cell
4
type II pneumocyte
3
T-helper 1 cell
3
colon epithelial cell
3
cortical cell of adrenal gland
3
endothelial cell of lymphatic vessel
3
enterocyte
3
gabaergic neuron
3
heart
3
liver
3
naive B cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
pancreas
3
skin fibroblast
3
stomach
3
type I pneumocyte
2
CD4-positive helper T cell
2
HepG2
2
Muller cell
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
Rh-4 cell
2
T follicular helper cell
2
T-helper 17 cell
2
T-helper 2 cell
2
acute myeloid leukemia cell
2
adipose-derived stem cell
2
aortic endothelial cell
2
basal cell
2
blood vessel smooth muscle cell
2
bone marrow cell
2
capillary endothelial cell
2
central memory CD8-positive, alpha-beta T cell
2
ciliated cell
2
club cell
2
coronary artery
2
differentiating adipose-derived stem cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
endocardial cell
2
endothelial cell of umbilical vein
2
enteric neuron
2
enteric smooth muscle cell
2
erythroid cell
2
extracellular matrix secreting cell
2
fetal cardiomyocyte
2
gamma-delta T cell
2
glial cell
2
glomerular visceral epithelial cell
2
hepatic stellate cell
2
keratinocyte
2
luminal epithelial cell of mammary gland
2
mammary gland epithelial cell
2
mature natural killer cell
2
medulla oblongata
2
megakaryocyte
2
memory T cell
2
memory regulatory T cell
2
mesangial cell
2
mesenchymal stem cell
2
mesothelial cell
2
midbrain
2
naive regulatory T cell
2
neuron
2
oligodendrocyte
2
oligodendrocyte precursor cell
2
pancreatic polypeptide-secreting cell
2
plasma cell
2
plasmacytoid dendritic cell
2
right atrium auricular region
2
schwann cell
2
skeletal muscle myoblast
2
smooth muscle cell of the esophagus
2
spinal cord
2
spleen
2
tibial artery
2
tibial nerve
2
type I muscle cell
2
type II muscle cell
1
786-O cell
1
A-673 cell
1
A172
1
A549
1
ACHN
1
AG04449 cell
1
AG04450 cell
1
AG08396 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
Ammon's horn
1
B-Lymphocytes
1
B-lymphocyte
1
BE(2)-C
1
BJ cell
1
CD1c-positive myeloid dendritic cell
1
CD4-Positive T-Lymphocytes
1
CD4-positive, alpha-beta T cell
1
CMK
1
COLO-829 cell
1
COLO205
1
Caco-2 cell
1
Caki2
1
D341 Med cell
1
DG-75 cell
1
Daoy
1
ECC-1
1
G-401 cell
1
GM03348
1
GM04503
1
GM04504
1
GM06990
1
GM10248
1
GM10266
GM12864
1
GM12865
1
GM12878
1
GM13976
1
GM13977
1
GM18507
1
GM19240
1
GM20000
1
GM23248
1
GP5d
1
Glioblastoma
1
H1-hESC
1
H4
1
H7-hESC
1
HAC cell
1
HAP-1
1
HBMEC cell
1
HCT-116 cell
1
HEK293
1
HGF
1
HL-60
1
HT-29
1
HUES6
1
HUES8
1
HeLa cell
1
Hodgkin lymphoma cell line
1
HuH-7
1
HuTu-80 cell
1
IMR-90
1
Ishikawa
1
Jurkat
1
K562
1
KARPAS-422 cell
1
KBM-7
1
Kasumi-1
1
L-1236 cell
1
L-428 cell
1
L1-S8
1
L1-S8R
1
LHCN-M2
1
LNCAP
1
LoVo cell
1
M059J
1
MCF-7
1
MCF10A-Er-Src cell
1
MDA-MB-231 cell
1
MG63
Organ
1
embryo
Date released
2
June, 2020
Software used
2
macs
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
biosample_term_name!
GM12864
month_released!
January, 2020
May, 2022
Showing 2 of 2 results
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Download
FileSet
DSR863QPI
released
Annotation file set
: Accessible chromatin annotation for Pluripotent stem cell hESC HUES8 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR365ACB
released
Annotation file set
: Accessible chromatin annotation for Blood Hematopoietic Stem Cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP