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Schema
Citing CMDGA
Clear Filters
Annotation type
3
accessible chromatin
2
variant allelic effects
1
eQTL
1
gene expression
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
snATAC-seq
Available data
3
bed bed3+
1
bigWig
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
5
hepatocyte
4
endothelial cell
4
endothelial cell of hepatic sinusoid
3
pancreatic ductal cell
3
smooth muscle cell
2
adipocyte
2
adipose-derived stem cell
2
differentiating adipose-derived stem cell
2
fibroblast
2
leukocyte
2
mesenchymal stem cell
2
pancreatic acinar cell
2
pancreatic stellate cell
2
skeletal muscle fiber
2
skeletal muscle satellite cell
2
type I muscle cell
2
type II muscle cell
1
CD4-positive helper T cell
1
Schwann cell
1
T cell
1
glial cell
1
liver
1
macrophage
1
neural cell
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
pancreatic delta cell
1
pancreatic endothelial cell
1
pancreatic immune cell
1
pancreatic polypeptide-secreting cell
1
pigmented layer of retina
1
preadipocyte
1
tissue-resident macrophage
1
type B pancreatic cell
Life stage
1
adult
1
unknown
Date released
6
November, 2021
2
May, 2022
1
February, 2024
1
June, 2020
Software used
3
macs
Lab
1
AMP-T2D consortium
1
Bing Ren, UCSD
1
Stephen Parker, UMich
Project
3
AMP
RFA
2
AMP2
1
AMP
organ_slims!
lymph node
Showing 3 of 3 results
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Download
FileSet
DSR680WZM
released
Annotation file set
: Accessible chromatin from snATAC-seq of smooth muscle cell from human skeletal muscle
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR267QTT
released
Annotation file set
: Accessible chromatin annotation of Smooth muscle cells from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP
FileSet
DSR309RZR
released
Annotation file set
: Cell type chromatin broad peaks and bw of smooth muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP