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Schema
Citing CMDGA
Clear Filters
Annotation type
5
accessible chromatin
3
candidate regulatory elements
3
target gene predictions
1
variant allelic effects
Annotation Category
5
cis-regulatory elements
Annotation type Category
4
snATAC-seq
Available data
5
bed bed3+
5
bigWig
1
bigBed narrowPeak
File set status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
4
primary cell
1
tissue
Biosample term
4
pancreatic stellate cell
3
pancreatic alpha cell
3
pancreatic beta cell
3
pancreatic delta cell
3
pancreatic ductal cell
2
endothelial cell
2
pancreatic acinar cell
2
pancreatic polypeptide-secreting cell
1
CD8-positive, alpha-beta T cell
1
Schwann cell
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
conventional dendritic cell
1
macrophage
1
megakaryocyte
1
memory B cell
1
monocyte
1
naive B cell
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
naive thymus-derived CD8-positive, alpha-beta T cell
1
natural killer cell
1
natural killer cell mediated cytotoxicity
1
non-classical monocyte
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic endothelial cell
1
pancreatic immune cell
1
plasmacytoid dendritic cell
1
regulatory T cell
1
stellate neuron
1
tissue-resident macrophage
1
type B pancreatic cell
Organ
4
epithelium
2
pancreas
Life stage
1
adult
Date released
3
January, 2021
2
February, 2024
Software used
5
macs
Lab
12
Bing Ren, UCSD
5
AMP-T2D consortium
5
Kyle Gaulton, UCSD
1
Katalin Susztak, Upenn
1
Stephen Parker, UMich
Project
3
T1D
2
AMP
RFA
3
T1D
2
AMP
Showing 5 of 5 results
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Download
FileSet
DSR369PUU
released
Annotation file set
: accessible chromatin annotation from scATAC-seq of Endothelial
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR489SMI
released
Annotation file set
: accessible chromatin annotation from snATAC-seq of memory_B
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR550HPP
released
Annotation file set
: accessible chromatin annotation from snATAC-seq of gamma
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR579LZJ
released
Annotation file set
: accessible chromatin annotation from snATAC-seq of endothelial
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR614CXC
released
Annotation file set
: pancreatic gamma cell accessible chromatin annotation from snATAC
Lab:
Kyle Gaulton, UCSD
Project:
AMP