Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
29
candidate regulatory elements
19
target gene predictions
15
chromatin state
3
accessible chromatin
1
eQTL
Annotation Category
3
cis-regulatory elements
Annotation type Category
2
snATAC-seq
1
DNase-seq
Available data
3
bed bed3+
2
bigWig
File set status
3
released
Genome assembly (visualization)
3
hg19
2
GRCh38
Organism
3
Homo sapiens
Biosample type
2
primary cell
1
tissue
Biosample term
3
colon epithelial cell
3
enterocyte
3
tibial artery
3
tibial nerve
2
enteric smooth muscle cell
2
muscle of leg
1
hindlimb muscle
1
GM23248
1
HCT-116 cell
1
HT-29
1
Peyer's patch
1
RKO
1
SW480
1
crypt of Lieberkuhn
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
enterocyte of epithelium of small intestine
1
forelimb muscle
1
gastrocnemius medialis
1
large intestine
1
limb
1
muscle of arm
1
paneth cell
1
proximal epiphysis of femur
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
1
sigmoid colon
1
small intestine
1
small intestine goblet cell
1
transverse colon
Organ
3
intestine
1
small intestine
0
limb
Date released
2
November, 2021
1
June, 2020
Software used
3
macs
Lab
2
Bing Ren, UCSD
1
AMP-T2D consortium
Project
2
ENCODE
1
AMP
RFA
2
ENCODE3
1
AMP
Showing 3 of 3 results
table-tab-icon
matrix-icon
Download
FileSet
DSR300AWQ
released
Annotation file set
: Accessible chromatin annotation of Smooth Muscle (Colon) 2 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR441RLT
released
Annotation file set
: Accessible chromatin annotation of Smooth Muscle (Colon) 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR074FIF
released
Annotation file set
: Accessible chromatin annotation for Digestive tract Intestine, Small from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP