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Schema
Citing CMDGA
Clear Filters
Annotation type
21
candidate regulatory elements
10
chromatin state
10
target gene predictions
6
accessible chromatin
5
gene expression
2
variant allelic effects
Annotation Category
6
cis-regulatory elements
Annotation type Category
4
DNase-seq
2
ATAC-seq
Available data
6
bed bed3+
4
bigWig
File set status
6
released
Genome assembly (visualization)
6
hg19
2
GRCh38
Organism
6
Homo sapiens
Biosample type
3
primary cell
2
tissue
1
cell line
Biosample term
10
kidney
3
glomerular visceral epithelial cell
2
glomerular endothelial cell
2
kidney glomerular epithelial cell
2
kidney tubule cell
2
renal cortical epithelial cell
2
renal pelvis
1
ACHN
1
Caki2
1
HEK293
1
RCC 7860
1
cortex of kidney
1
epithelial cell of proximal tubule
1
foreskin fibroblast
1
foreskin keratinocyte
1
foreskin melanocyte
1
glomerular epithelium
1
kidney capillary endothelial cell
1
kidney distal convoluted tubule epithelial cell
1
kidney epithelial cell
1
kidney interstitial cell
1
kidney loop of Henle epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
left renal cortex interstitium
1
left renal pelvis
1
metanephros
1
parietal epithelial cell
1
renal cell carcinoma
1
renal cortex interstitium
1
renal cortex tubule
1
renal intercalated cell
1
renal principal cell
1
right kidney
1
right renal cortex interstitium
1
right renal pelvis
1
ureteric bud
Organ
6
kidney
4
epithelium
2
ureter
0
penis
Life stage
2
adult
1
child
1
fetal
Date released
2
August, 2021
2
January, 2020
2
June, 2020
Software used
6
macs
Lab
4
AMP-T2D consortium
2
Katalin Susztak, Upenn
Project
6
AMP
RFA
4
AMP
2
AMP2
Showing 6 of 6 results
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Download
FileSet
DSR884VIR
released
Annotation file set
: Accessible chromatin from Katalin Susztak 75kidney Project of Podocytes
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR366JKU
released
Annotation file set
: Accessible chromatin from Katalin Susztak 75kidney Project of PT-S1
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR370KIZ
released
Annotation file set
: Accessible chromatin annotation for Kidney Kidney Pelvis from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR012KGK
released
Annotation file set
: Accessible chromatin annotation for Kidney Glomerular visceral epithelial cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR855KHX
released
Annotation file set
: Accessible chromatin annotation of kidney podocytes (glomerular visceral epithelial cell) from GSE115961 DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR570SAY
released
Annotation file set
: Accessible chromatin annotation of kidney renal pelvis from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP