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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
Annotation Category
2
cis-regulatory elements
Annotation type Category
1
ATAC-seq
1
snATAC-seq
Available data
3
bed bed3+
2
bigWig
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
primary cell
1
cell line
Biosample term
16
monocyte
6
hepatocyte
5
pancreatic beta cell
4
pancreatic alpha cell
3
cardiac fibroblast
3
B cell
3
CD8-positive, alpha-beta T cell
3
endothelial cell
3
memory B cell
3
naive B cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
natural killer cell
3
osteoblast
3
pancreatic acinar cell
3
pancreatic delta cell
3
pancreatic ductal cell
3
regulatory T cell
2
T follicular helper cell
2
T-helper 1 cell
2
T-helper 17 cell
2
T-helper 2 cell
2
aortic endothelial cell
2
capillary endothelial cell
2
central memory CD8-positive, alpha-beta T cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
extracellular matrix secreting cell
2
gamma-delta T cell
2
macrophage
2
mature natural killer cell
2
memory T cell
2
memory regulatory T cell
2
pancreatic polypeptide-secreting cell
2
pancreatic stellate cell
2
plasmacytoid dendritic cell
1
T cell
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
astrocyte
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
basal cell
1
brain microvascular endothelial cell
1
brain pericyte
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
ciliated cell
1
club cell
1
conventional dendritic cell
1
endothelial cell of artery
1
endothelial cell of lymphatic vessel
1
endothelial cell of umbilical vein
1
epithelial cell of proximal tubule
1
erythrocyte
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
hepatic stellate cell
1
immature natural killer cell
1
kidney capillary endothelial cell
1
kidney distal convoluted tubule epithelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
kidney interstitial cell
1
kidney loop of Henle epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal convoluted tubule epithelial cell & kidney proximal straight tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
kidney tubule cell
1
leukocyte
1
lymphocyte(CL:0000542) and natural killer cell(CL:0000623)
1
macrophage(CL:0000235) and neutrophil(CL:0000775)
1
megakaryocyte
1
mesenchymal stem cell
1
myeloid dendritic cell
1
myofibroblast cell
1
naive regulatory T cell
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
natural killer cell mediated cytotoxicity
1
neuroendocrine cell
1
non-classical monocyte
1
pancreatic endothelial cell
1
pancreatic immune cell
1
pericyte cell
1
plasma cell
1
proximal tubule cells with injury markers
1
renal cortical epithelial cell
1
renal intercalated cell
1
renal principal cell
1
retinal pigment epithelial cell
1
skeletal muscle cell
1
skeletal muscle myoblast
1
skeletal muscle satellite cell
1
smooth muscle cell
1
smooth muscle cell of the brain vasculature
1
stellate neuron
1
type I muscle cell
1
type I pneumocyte
1
type II muscle cell
1
type II pneumocyte
Organ
1
epithelium
1
kidney
Life stage
2
adult
Date released
2
August, 2021
Software used
2
macs
Lab
2
Katalin Susztak, Upenn
Project
2
AMP
RFA
2
AMP2
month_released!
November, 2021
Showing 2 of 2 results
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Download
FileSet
DSR121DOH
released
Annotation file set
: Accessible chromatin from Katalin Susztak 75kidney Project of Lymphcytes
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR884VIR
released
Annotation file set
: Accessible chromatin from Katalin Susztak 75kidney Project of Podocytes
Lab:
Katalin Susztak, Upenn
Project:
AMP