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Citing CMDGA
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Annotation type
3
accessible chromatin
3
differential activity
2
gene expression
1
target gene predictions
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
snATAC-seq
Available data
3
bed bed3+
3
bigWig
1
bigBed narrowPeak
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
8
tissue
3
primary cell
Biosample term
8
pancreatic beta cell
7
pancreatic alpha cell
6
pancreatic acinar cell
6
pancreatic ductal cell
5
pancreatic delta cell
2
pancreatic polypeptide-secreting cell
2
pancreatic stellate cell
1
islet of Langerhans
Organ
3
pancreas
2
connective tissue
Life stage
1
adult
Date released
1
January, 2021
1
June, 2021
1
November, 2021
Software used
3
macs
Lab
2
Kyle Gaulton, UCSD
1
Bing Ren, UCSD
Project
1
AMP
1
ENCODE
1
T1D
RFA
1
AMP
1
ENCODE3
1
T1D
organ_slims!
thymus
Showing 3 of 3 results
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Download
FileSet
DSR217ZJA
released
Annotation file set
: Accessible chromatin annotation of Fetal Pancreatic Islet Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR223BJV
released
Annotation file set
: accessible chromatin annotation from snATAC-seq of activated_stellate
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR364QCE
released
Annotation file set
: pancreatic stellate cell accessible chromatin annotation from snATAC
Lab:
Kyle Gaulton, UCSD
Project:
AMP