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Citing CMDGA
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Annotation type
16
eQTL
12
gene expression
5
Fine-mapped variants
4
chromatin state
3
accessible chromatin
2
binding sites
2
candidate regulatory elements
2
histone modifications
2
sQTL
2
target gene predictions
2
variant allelic effects
2
variant to gene
Annotation Category
3
cis-regulatory elements
Annotation type Category
2
DNase-seq
1
ATAC-seq
Available data
8
bed bed3+
bigWig
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
7
pigmented layer of retina
7
retina
3
stomach
2
heart
2
islet of Langerhans
2
liver
2
pancreas
1
Ammon's horn
1
Peyer's patch
1
adipose tissue
1
adrenal gland
1
brain
1
breast epithelium
1
caudate nucleus
1
chorion membrane
1
cortex of kidney
1
crypt of Lieberkuhn
1
embryonic facial prominence
1
esophagus muscularis mucosa
1
esophagus squamous epithelium
1
eye
1
frontal cortex
1
gastrocnemius medialis
1
globus pallidus
1
glomerular epithelium
1
inferior parietal cortex
1
kidney
1
large intestine
1
limb
1
medulla oblongata
1
midbrain
1
muscle of leg
1
occipital lobe
1
ovary
1
placenta
1
pons
1
prefrontal cortex
1
prostate gland
1
psoas muscle
1
putamen
1
renal cortex tubule
1
right atrium auricular region
1
right lung
1
sigmoid colon
1
small intestine
1
spinal cord
1
spleen
1
superior temporal gyrus
1
testis
1
thymus
1
thyroid gland
1
tibial artery
1
tibial nerve
1
tongue
1
transverse colon
1
trophoblast
1
umbilical cord
1
upper lobe of left lung
1
urinary bladder
1
uterus
Organ
2
pancreas
1
brain
Life stage
1
adult
Date released
2
June, 2020
1
May, 2021
Software used
3
macs
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
files.file_type!
bigWig
organ_slims!
ureter
Showing 3 of 3 results
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FileSet
DSR456JHZ
released
Annotation file set
: Accessible chromatin of ATAC-seq of human islet cytokine-treated for GSE123404
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR953RQL
released
Annotation file set
: Accessible chromatin annotation for Pancreas Pancreatic islets from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR509CLD
released
Annotation file set
: Accessible chromatin annotation for Neural Putamen from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP