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Schema
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Annotation type
18
differential activity
12
target gene predictions
9
candidate regulatory elements
4
accessible chromatin
3
chromatin state
2
gene expression
2
histone modifications
1
eQTL
Annotation Category
4
cis-regulatory elements
Annotation type Category
2
snATAC-seq
1
ATAC-seq
1
DNase-seq
Available data
4
bed bed3+
3
bigWig
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
1
in vitro differentiated cells
Biosample term
40
fibroblast
25
endothelial cell
23
macrophage
23
retina
22
GABAergic neuron
21
glutamatergic neuron
21
smooth muscle cell
20
pigmented layer of retina
18
monocyte
17
astrocyte
13
excitatory neuron
12
hepatocyte
10
kidney
10
neural progenitor cell
10
pericyte cell
10
retinal pigment epithelial cell
8
B cell
8
EndoC_BH1
8
T cell
8
erythroblast
8
medium spiny neuron
8
pancreatic beta cell
8
pancreatic ductal cell
8
pericyte
8
vip GABAergic cortical interneuron
7
L2/3 intratelencephalic projecting glutamatergic neuron
7
adipocyte
7
islet of Langerhans
7
keratinocyte
7
oligodendrocyte
7
pancreatic acinar cell
7
pancreatic alpha cell
6
L6 intratelencephalic projecting glutamatergic neuron
6
SGBS preadipocytes
6
embryonic stem cell
6
endothelial cell of hepatic sinusoid
6
endothelial cell of lymphatic vessel
6
skeletal muscle satellite cell
6
sncg GABAergic interneuron
6
sst GABAergic interneuron
6
thyroid follicular cell
5
CD8-positive, alpha-beta T cell
5
L5 intratelencephalic projecting glutamatergic neuron
5
cell of skeletal muscle
5
chondrocyte
5
heart
5
inhibitory neuron
5
megakaryocyte
5
osteoblast
5
pancreas
5
pancreatic delta cell
5
progenitor cell
5
pvalb GABAergic interneuron
5
regulatory T cell
5
skeletal muscle fiber
4
L2/3-6 intratelencephalic projecting glutamatergic cortical neuron
4
L4 intratelencephalic projecting glutamatergic neuron
4
adrenal gland glandular cell
4
endocardial cell
4
fibroblast of cardiac tissue
4
hepatic stellate cell
4
liver
4
memory B cell
4
mesothelial cell
4
muscle precursor cell
4
natural killer cell
4
near-projecting glutamatergic cortical neuron
4
oligodendrocyte precursor cell
4
pancreatic stellate cell
4
type II pneumocyte
3
cardiac fibroblast
3
L4/5 intratelencephalic projecting glutamatergic neuron
3
L6 corticothalamic-projecting glutamatergic cortical neuron
3
L6b glutamatergic cortical neuron
3
Microglia
3
Schwann cell
3
T-helper 1 cell
3
colon epithelial cell
3
coronary artery
3
cortical cell of adrenal gland
3
double-positive, alpha-beta thymocyte
3
endothelial cell of vascular tree
3
enteric neuron
3
enterocyte
3
gabaergic neuron
3
glomerular visceral epithelial cell
3
heart left ventricle
3
melanocyte
3
mesenchymal stem cell
3
naive B cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
neuron
3
regular atrial cardiac myocyte
3
regular ventricular cardiac myocyte
3
right atrium auricular region
3
skin fibroblast
3
stomach
3
tibial artery
3
tibial nerve
3
type I muscle cell
3
type I pneumocyte
3
type II muscle cell
2
Ammon's horn
2
B Cell
2
CD4-positive helper T cell
2
HepG2
2
Muller cell
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
Purkinje cell
2
Rh-4 cell
2
T follicular helper cell
2
T-helper 17 cell
2
T-helper 2 cell
2
acute myeloid leukemia cell
2
adipose tissue
2
adipose-derived stem cell
2
aortic endothelial cell
2
basal cell
2
blood vessel smooth muscle cell
2
bone marrow cell
2
brain
2
brain pericyte
2
capillary endothelial cell
2
cardiac muscle cell
2
caudate nucleus
2
cell
2
central memory CD8-positive, alpha-beta T cell
2
cholangiocyte
2
choroid plexus epithelial cell
2
ciliated cell
2
ciliated epithelial cell
2
club cell
2
differentiating adipose-derived stem cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
embryonic blood vessel endothelial progenitor cell
2
endothelial cell of umbilical vein
2
enteric smooth muscle cell
2
erythroid cell
2
extracellular matrix secreting cell
2
fast muscle cell
2
fetal cardiomyocyte
2
frontal cortex
2
gamma-delta T cell
2
glial cell
2
globus pallidus
2
glomerular endothelial cell
2
kidney glomerular epithelial cell
2
kidney tubule cell
2
leukocyte
2
luminal epithelial cell of mammary gland
2
lung multiciliated epithelial cell
2
mammary gland epithelial cell
2
mature NK T cell
2
mature natural killer cell
2
medial ganglionic eminence derived interneuron
2
medulla oblongata
2
medullary thymic epithelial cell(myoid Type IIa)
2
medullary thymic epithelial cell(myoid)
2
memory T cell
2
memory regulatory T cell
2
mesangial cell
2
midbrain
2
muscle of leg
2
naive regulatory T cell
2
neural cell
2
occipital lobe
2
omental fat pad
2
pancreatic polypeptide-secreting cell
2
parietal cell
2
plasma cell
2
plasmacytoid dendritic cell
2
pons
2
putamen
2
renal cortical epithelial cell
2
renal pelvis
2
retinal bipolar neuron
2
schwann cell
2
skeletal muscle myoblast
2
slow muscle cell
2
smooth muscle cell of the esophagus
2
smooth muscle myoblast
2
spinal cord
2
spleen
2
stromal cell
2
subcutaneous adipose tissue
2
superior temporal gyrus
2
vascular associated smooth muscle cell
1
hindlimb muscle
1
786-O cell
1
A-673 cell
1
A172
1
A549
1
ACHN
1
AG04449 cell
1
AG04450 cell
1
AG08396 cell
1
AG09309 cell
1
AG09319 cell
Date released
1
April, 2020
1
January, 2021
1
June, 2020
1
May, 2020
Software used
2
macs
Lab
2
AMP-T2D consortium
1
Kyle Gaulton, UCSD
1
Xin Sun, UCSD
Project
2
AMP
1
LungMap
1
T1D
Collection Tags
1
ChIP-Atlas
1
T1D
RFA
2
AMP
1
LungMap2
1
T1D
Showing 4 of 4 results
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Download
FileSet
DSR382SMZ
released
Annotation file set
: ATAC-seq peaks in NK cells from lung snATAC-seq
Lab:
Xin Sun, UCSD
Project:
LungMap
FileSet
DSR888CSC
released
Annotation file set
: Accessible chromatin annotation for Blood CD56+ from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR197KBT
released
Annotation file set
: accessible chromatin annotation from snATAC-seq of adaptive_NK
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR920YKW
released
Annotation file set
: GSE118189 ATACseq accessible chromatin of normal natural killer cell
Lab:
AMP-T2D consortium
Project:
AMP