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Schema
Citing CMDGA
Clear Filters
Annotation type
5
accessible chromatin
3
binding sites
2
candidate regulatory elements
2
gene expression
2
histone modifications
2
target gene predictions
1
chromatin state
Annotation Category
5
cis-regulatory elements
Annotation type Category
3
DNase-seq
2
ATAC-seq
Available data
5
bed bed3+
3
bigWig
File set status
5
released
Genome assembly (visualization)
5
hg19
3
GRCh38
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
18
monocyte
16
endothelial cell
16
fibroblast
13
excitatory neuron
13
retina
12
macrophage
10
kidney
10
neural progenitor cell
10
pericyte cell
10
pigmented layer of retina
9
retinal pigment epithelial cell
9
smooth muscle cell
8
B cell
8
astrocyte
8
hepatocyte
8
pancreatic beta cell
8
pancreatic ductal cell
7
T cell
7
islet of Langerhans
7
pancreatic acinar cell
7
pancreatic alpha cell
6
adipocyte
6
embryonic stem cell
6
endothelial cell of hepatic sinusoid
6
glutamatergic neuron
5
CD8-positive, alpha-beta T cell
5
SGBS preadipocytes
5
chondrocyte
5
erythroblast
5
heart
5
inhibitory neuron
5
osteoblast
5
pancreas
5
pancreatic delta cell
5
regulatory T cell
5
skeletal muscle fiber
5
skeletal muscle satellite cell
4
liver
4
memory B cell
4
natural killer cell
4
pancreatic stellate cell
4
type II pneumocyte
3
cardiac fibroblast
3
T-helper 1 cell
3
coronary artery
3
cortical cell of adrenal gland
3
endothelial cell of lymphatic vessel
3
enterocyte
3
gabaergic neuron
3
heart left ventricle
3
hepatic stellate cell
3
mesenchymal stem cell
3
naive B cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
right atrium auricular region
3
skin fibroblast
3
stomach
3
tibial artery
3
tibial nerve
3
type I muscle cell
3
type I pneumocyte
3
type II muscle cell
2
Ammon's horn
2
CD4-positive helper T cell
2
Muller cell
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
T follicular helper cell
2
T-helper 17 cell
2
T-helper 2 cell
2
acute myeloid leukemia cell
2
adipose tissue
2
adipose-derived stem cell
2
aortic endothelial cell
2
basal cell
2
blood vessel smooth muscle cell
2
bone marrow cell
2
brain
2
capillary endothelial cell
2
cardiac muscle cell
2
caudate nucleus
2
central memory CD8-positive, alpha-beta T cell
2
ciliated cell
2
club cell
2
differentiating adipose-derived stem cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
endocardial cell
2
endothelial cell of umbilical vein
2
enteric neuron
2
enteric smooth muscle cell
2
erythroid cell
2
extracellular matrix secreting cell
2
fetal cardiomyocyte
2
fibroblast of cardiac tissue
2
frontal cortex
2
gamma-delta T cell
2
glial cell
2
globus pallidus
2
glomerular endothelial cell
2
glomerular visceral epithelial cell
2
keratinocyte
2
kidney glomerular epithelial cell
2
kidney tubule cell
2
leukocyte
2
luminal epithelial cell of mammary gland
2
mammary gland epithelial cell
2
mature natural killer cell
2
medulla oblongata
2
megakaryocyte
2
memory T cell
2
memory regulatory T cell
2
mesangial cell
2
mesothelial cell
2
midbrain
2
muscle of leg
2
naive regulatory T cell
2
neuron
2
occipital lobe
2
oligodendrocyte
2
oligodendrocyte precursor cell
2
omental fat pad
2
pancreatic polypeptide-secreting cell
2
plasma cell
2
plasmacytoid dendritic cell
2
pons
2
putamen
2
renal cortical epithelial cell
2
renal pelvis
2
schwann cell
2
skeletal muscle myoblast
2
smooth muscle cell of the esophagus
2
spleen
2
subcutaneous adipose tissue
2
superior temporal gyrus
1
hindlimb muscle
1
B-Lymphocytes
1
B-lymphocyte
1
CD1c-positive myeloid dendritic cell
1
CD4-Positive T-Lymphocytes
1
CD4-positive, alpha-beta T cell
1
Glioblastoma
1
Ishikawa
1
Peyer's patch
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
Schwann cell
1
Th1 cell
1
Th17 cell
1
Th2 cell
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
adrenal gland
1
alveolar macrophage
1
aortic adventitial fibroblast
1
ascending aorta
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
basal cell of epidermis
1
bipolar neuron
1
brain microvascular endothelial cell
1
brain pericyte
1
breast epithelium
1
bronchial epithelial cell
1
cardiac endothelial cell
1
cardiac precursors
1
cerebellar cortex
1
cerebellum
1
cholangiocyte
1
chorion membrane
1
choroid plexus epithelial cell
1
chromaffin cell of adrenal gland
1
ciliated epithelial cell
1
colon goblet cell
1
conventional dendritic cell
1
cortex of kidney
1
crypt of Lieberkuhn
1
dedifferentiated amniotic fluid mesenchymal stem cell
1
dermis microvascular lymphatic vessel endothelial cell
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
eccrine cell
1
embryonic facial prominence
1
endothelial cell of artery
1
enterochromaffin-like cell
1
enterocyte of epithelium of small intestine
1
enteroendocrine cell
1
epithelial cell of proximal tubule
1
erythrocyte
1
esophagus muscularis mucosa
1
esophagus squamous epithelium
1
extravillous trophoblast
1
eye
1
fetal heart
1
fetal thymocyte
1
fibroblast of mammary gland
1
fibroblast of peridontal ligament
1
fibroblast of pulmonary artery
1
fibroblast of villous mesenchyme
Organ
5
connective tissue
Life stage
2
unknown
1
adult
Date released
2
June, 2020
2
November, 2020
1
February, 2021
Software used
5
macs
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
biosample_type!
cell line
disease_term_name!
age-related macular degeneration
organ_slims!
large intestine
Showing 5 of 5 results
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Download
FileSet
DSR906VQP
released
Annotation file set
: GSE120755 DNase-seq accessible chromatin annotation of osteoporosis cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR010PUE
released
Annotation file set
: Accessible chromatin of E-MTAB-6834 - ATAC-seq of primary mesenchymal stem cell (MSC)-derived osteoblasts (differentiated with BMP2) from 4 human donors
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR383TPO
released
Annotation file set
: GSE120755 accessible chromatin annotation of osteoporosis cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR028APK
released
Annotation file set
: Accessible chromatin annotation for Bone Osteobl from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR303JQK
released
Annotation file set
: Accessible chromatin annotation for Bone Osteoblasts from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP