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Schema
Citing CMDGA
Clear Filters
Annotation type
5
accessible chromatin
3
binding sites
2
candidate regulatory elements
2
gene expression
2
histone modifications
2
target gene predictions
1
chromatin state
Annotation Category
5
cis-regulatory elements
Annotation type Category
3
DNase-seq
2
ATAC-seq
Available data
5
bed bed3+
3
bigWig
File set status
5
released
Genome assembly (visualization)
5
hg19
3
GRCh38
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
16
fibroblast
10
kidney
10
pericyte cell
6
adipocyte
5
chondrocyte
5
osteoblast
4
fibroblast of cardiac tissue
4
pancreatic stellate cell
3
cardiac fibroblast
3
glomerular visceral epithelial cell
3
hepatic stellate cell
3
mesenchymal stem cell
3
skin fibroblast
2
adipose tissue
2
brain pericyte
2
extracellular matrix secreting cell
2
glomerular endothelial cell
2
kidney glomerular epithelial cell
2
kidney tubule cell
2
mesangial cell
2
omental fat pad
2
renal cortical epithelial cell
2
renal pelvis
2
subcutaneous adipose tissue
1
ACHN
1
Caki2
1
GM23248
1
HEK293
1
RCC 7860
1
SGBS preadipocytes
1
adipose-derived mesenchymal stem cell
1
cortex of kidney
1
dedifferentiated amniotic fluid mesenchymal stem cell
1
epithelial cell of proximal tubule
1
fibroblast of mammary gland
1
fibroblast of peridontal ligament
1
fibroblast of pulmonary artery
1
fibroblast of the conjunctiva
1
fibroblast of villous mesenchyme
1
foreskin fibroblast
1
glomerular epithelium
1
kidney capillary endothelial cell
1
kidney distal convoluted tubule epithelial cell
1
kidney epithelial cell
1
kidney interstitial cell
1
kidney loop of Henle epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
left renal cortex interstitium
1
left renal pelvis
1
luteal cell
1
metanephros
1
parietal epithelial cell
1
preadipocyte
1
pulmonary interstitial fibroblast
1
renal cell carcinoma
1
renal cortex interstitium
1
renal cortex tubule
1
renal intercalated cell
1
renal principal cell
1
right kidney
1
right renal cortex interstitium
1
right renal pelvis
1
stromal cell
1
ureteric bud
Organ
5
connective tissue
0
kidney
Life stage
2
unknown
1
adult
Date released
2
June, 2020
2
November, 2020
1
February, 2021
Software used
5
macs
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
month_released!
March, 2023
Showing 5 of 5 results
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Download
FileSet
DSR906VQP
released
Annotation file set
: GSE120755 DNase-seq accessible chromatin annotation of osteoporosis cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR010PUE
released
Annotation file set
: Accessible chromatin of E-MTAB-6834 - ATAC-seq of primary mesenchymal stem cell (MSC)-derived osteoblasts (differentiated with BMP2) from 4 human donors
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR383TPO
released
Annotation file set
: GSE120755 accessible chromatin annotation of osteoporosis cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR028APK
released
Annotation file set
: Accessible chromatin annotation for Bone Osteobl from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR303JQK
released
Annotation file set
: Accessible chromatin annotation for Bone Osteoblasts from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP