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Citing CMDGA
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Annotation type
1
accessible chromatin
1
target gene predictions
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
snATAC-seq
Available data
1
bed bed3+
1
bigWig
File set status
1
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
3
colon epithelial cell
3
enterocyte
2
enteric smooth muscle cell
1
HCT-116 cell
1
HT-29
1
Peyer's patch
1
RKO
1
SW480
1
crypt of Lieberkuhn
1
enterocyte of epithelium of small intestine
1
large intestine
1
paneth cell
1
sigmoid colon
1
small intestine
1
small intestine goblet cell
1
transverse colon
Organ
1
epithelium
1
intestine
Date released
1
November, 2021
Software used
1
macs
Lab
1
Bing Ren, UCSD
Project
1
ENCODE
RFA
1
ENCODE3
month_released!
January, 2022
organ_slims!
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Download
FileSet
DSR173UGN
released
Annotation file set
: Accessible chromatin annotation of Paneth Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE