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Schema
Citing CMDGA
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Annotation type
2
accessible chromatin
2
gene expression
1
binding sites
1
caQTL
1
histone modifications
1
target gene predictions
Annotation Category
2
cis-regulatory elements
Annotation type Category
1
ATAC-seq
1
snATAC-seq
Available data
2
bed bed3+
2
bigWig
File set status
2
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
2
Homo sapiens
Biosample type
1
cell line
1
primary cell
Biosample term
6
endothelial cell of hepatic sinusoid
3
cardiac fibroblast
3
coronary artery
3
endothelial cell of lymphatic vessel
2
aortic endothelial cell
2
capillary endothelial cell
2
choroid plexus epithelial cell
2
endothelial cell of umbilical vein
1
ascending aorta
1
brain microvascular endothelial cell
1
dermis microvascular lymphatic vessel endothelial cell
1
fibroblast of pulmonary artery
1
kidney capillary endothelial cell
1
placental villus capillary endothelial cell
1
pulmonary artery endothelial cell
1
smooth muscle cell of the brain vasculature
1
smooth muscle cell of the coronary artery
1
thoracic aorta
Organ
2
blood vessel
2
vasculature
1
artery
1
epithelium
1
extraembryonic component
1
heart
1
placenta
Life stage
1
unknown
Date released
1
February, 2021
1
November, 2021
Software used
2
macs
Lab
1
AMP-T2D consortium
1
Bing Ren, UCSD
Project
1
AMP
1
ENCODE
RFA
1
AMP
1
ENCODE3
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Showing 2 of 2 results
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Download
FileSet
DSR100TUS
released
Annotation file set
: Accessible chromatin annotation of Fetal Placental Endothelial Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR442EVO
released
Annotation file set
: Accessible chromatin of smooth muscle cell of the coronary artery from GSE113348 ATAC-seq cell lines
Lab:
AMP-T2D consortium
Project:
AMP